Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11838567	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11840911	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11841138	0.86[EUR][1000 genomes]
rs11841148	0.86[EUR][1000 genomes]
rs11841157	0.86[EUR][1000 genomes]
rs11841439	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11843086	0.82[EUR][1000 genomes]
rs11843900	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12860598	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12864518	0.86[EUR][1000 genomes]
rs12866053	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12866393	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12871787	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12873225	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1576607	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs34203921	0.86[EUR][1000 genomes]
rs34715453	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs34825298	0.92[EUR][1000 genomes]
rs35243951	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs35253788	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs35409650	0.86[EUR][1000 genomes]
rs35502883	0.83[EUR][1000 genomes]
rs36018849	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs71434734	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7987685	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7993901	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv528336	chr13:30194288-30226498	Enhancers Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:30193400-30196400	Enhancers	NHDF-Ad	bronchial
2	chr13:30193800-30196400	Enhancers	Muscle Satellite Cultured Cells	--
3	chr13:30193800-30197000	Enhancers	Osteobl	bone
4	chr13:30194200-30196400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr13:30194400-30196600	Enhancers	NHEK	skin
6	chr13:30194600-30196400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr13:30195000-30196400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr13:30195000-30198800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr13:30195800-30196200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr13:30195800-30198800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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