Variant report

Variant	rs8012486
Chromosome Location	chr14:85741242-85741243
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10134214	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10220585	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10498582	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12435232	0.85[EUR][1000 genomes]
rs12435574	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12879855	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1375575	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1839313	0.85[EUR][1000 genomes]
rs2053514	0.97[ASN][1000 genomes]
rs2372886	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34155469	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34662815	0.84[ASN][1000 genomes]
rs35048084	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8011992	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs8022384	0.85[EUR][1000 genomes]
rs8022603	0.85[EUR][1000 genomes]
rs961166	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422273	chr14:85703149-85767292	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv3428690	chr14:85740890-85741318	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:85740600-85745600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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