Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1170578	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1170622	0.92[ASN][1000 genomes]
rs1170623	0.92[ASN][1000 genomes]
rs1170624	0.92[ASN][1000 genomes]
rs1170625	0.92[ASN][1000 genomes]
rs1186396	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2565770	0.82[EUR][1000 genomes]
rs779995	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs779996	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs779997	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs780028	0.82[EUR][1000 genomes]
rs780029	0.82[EUR][1000 genomes]
rs780030	0.82[EUR][1000 genomes]
rs780031	0.82[EUR][1000 genomes]
rs780032	0.82[EUR][1000 genomes]
rs780033	0.82[EUR][1000 genomes]
rs780040	0.98[ASN][1000 genomes]
rs780041	0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs780042	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs780044	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs780050	0.81[EUR][1000 genomes]
rs809053	0.98[ASN][1000 genomes]
rs811901	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874989	chr2:124892592-125176030	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:125012800-125014800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr2:125013600-125014400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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