Variant report

Variant	rs8022646
Chromosome Location	chr14:68983519-68983520
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:68982120..68984316-chr14:68992913..68995083,2	MCF-7	breast:
2	chr14:68981466..68983617-chr14:69258433..69260772,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs35538152	1.00[AMR][1000 genomes]
rs4902572	1.00[AMR][1000 genomes]
rs57955495	1.00[AMR][1000 genomes]
rs61166822	1.00[AMR][1000 genomes]
rs73274116	1.00[AMR][1000 genomes]
rs73274136	1.00[AMR][1000 genomes]
rs73274156	1.00[AMR][1000 genomes]
rs73274164	1.00[AMR][1000 genomes]
rs73278399	1.00[AMR][1000 genomes]
rs73278401	1.00[AMR][1000 genomes]
rs73280314	1.00[AMR][1000 genomes]
rs73282338	1.00[AMR][1000 genomes]
rs74058874	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv832822	chr14:68874640-69060272	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:79 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68968000-68991200	Enhancers	Fetal Lung	lung
2	chr14:68971000-68983800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr14:68973400-68985000	Weak transcription	Colonic Mucosa	Colon
4	chr14:68973800-68984600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr14:68974800-68984600	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr14:68974800-68984800	Weak transcription	Brain Cingulate Gyrus	brain
7	chr14:68976400-68985800	Weak transcription	Duodenum Mucosa	Duodenum
8	chr14:68976800-68983800	Weak transcription	Gastric	stomach
9	chr14:68977400-68984400	Weak transcription	HepG2	liver
10	chr14:68977600-68983600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr14:68977600-68985800	Weak transcription	Osteobl	bone
12	chr14:68977600-68988400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr14:68977800-68984600	Weak transcription	Left Ventricle	heart
14	chr14:68978200-68983800	Weak transcription	Right Atrium	heart
15	chr14:68979000-68983800	Weak transcription	Pancreas	Pancrea
16	chr14:68979000-68985200	Weak transcription	Aorta	Aorta
17	chr14:68979600-68983600	Weak transcription	Fetal Heart	heart
18	chr14:68979800-68983800	Weak transcription	Fetal Kidney	kidney
19	chr14:68980000-68984800	Weak transcription	Spleen	Spleen
20	chr14:68980200-68983600	Weak transcription	Ovary	ovary
21	chr14:68980200-68984200	Weak transcription	Skeletal Muscle Male	skeletal muscle
22	chr14:68980200-68984600	Weak transcription	Duodenum Smooth Muscle	Duodenum
23	chr14:68980200-68984600	Weak transcription	Skeletal Muscle Female	skeletal muscle
24	chr14:68980200-68984600	Weak transcription	Small Intestine	intestine
25	chr14:68980200-68985000	Weak transcription	Right Ventricle	heart
26	chr14:68980200-68985200	Weak transcription	Rectal Mucosa Donor 31	rectum
27	chr14:68980200-68985600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr14:68980200-68985600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr14:68980200-68985600	Weak transcription	NHDF-Ad	bronchial
30	chr14:68980200-68985600	Weak transcription	NHLF	lung
31	chr14:68980400-68984800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr14:68980400-68985000	Weak transcription	Sigmoid Colon	Sigmoid Colon
33	chr14:68980400-68985600	Weak transcription	Rectal Mucosa Donor 29	rectum
34	chr14:68980600-68986000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
35	chr14:68981000-68984000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
36	chr14:68981000-68984200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
37	chr14:68981000-68984800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
38	chr14:68981200-68984000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
39	chr14:68981400-68983600	Weak transcription	Colon Smooth Muscle	Colon
40	chr14:68981400-68983800	Weak transcription	Stomach Smooth Muscle	stomach
41	chr14:68981400-68984000	Weak transcription	Primary T cells from cord blood	blood
42	chr14:68981400-68984000	Weak transcription	Fetal Thymus	thymus
43	chr14:68981400-68984600	Weak transcription	Primary T cells fromperipheralblood	blood
44	chr14:68981400-68984600	Weak transcription	Brain Anterior Caudate	brain
45	chr14:68981400-68984600	Weak transcription	Esophagus	oesophagus
46	chr14:68981400-68984600	Weak transcription	Fetal Muscle Trunk	muscle
47	chr14:68981400-68984600	Weak transcription	Rectal Smooth Muscle	rectum
48	chr14:68981400-68984600	Weak transcription	Thymus	Thymus
49	chr14:68981400-68984800	Weak transcription	Primary T helper cells fromperipheralblood	blood
50	chr14:68981400-68984800	Weak transcription	Lung	lung

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