Variant report

Variant	rs8092564
Chromosome Location	chr18:30259843-30259844
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs11081778	0.91[ASN][1000 genomes]
rs1125317	0.88[ASN][1000 genomes]
rs11875943	0.91[ASN][1000 genomes]
rs12607749	0.88[ASN][1000 genomes]
rs12957148	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12961515	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13381681	0.87[CHB][hapmap];0.88[JPT][hapmap];0.88[ASN][1000 genomes]
rs1511036	0.88[ASN][1000 genomes]
rs1523580	0.90[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1523581	0.93[CHB][hapmap];0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs1523582	0.94[CHB][hapmap];0.94[JPT][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1523584	0.81[EUR][1000 genomes]
rs1523585	0.88[ASN][1000 genomes]
rs1523586	0.88[ASN][1000 genomes]
rs1523587	0.88[ASN][1000 genomes]
rs1523589	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs162418	0.87[JPT][hapmap]
rs162419	0.87[JPT][hapmap]
rs162420	0.93[JPT][hapmap]
rs162421	0.88[JPT][hapmap]
rs1846013	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1980034	1.00[CHB][hapmap];0.83[CHD][hapmap];0.94[JPT][hapmap];0.91[ASN][1000 genomes]
rs1980035	0.91[ASN][1000 genomes]
rs1980036	0.91[ASN][1000 genomes]
rs2421639	0.88[ASN][1000 genomes]
rs2901486	0.88[ASN][1000 genomes]
rs330296	0.91[JPT][hapmap]
rs330297	0.88[JPT][hapmap]
rs330298	0.88[JPT][hapmap]
rs330299	0.87[JPT][hapmap]
rs330301	0.87[JPT][hapmap]
rs330303	0.88[JPT][hapmap]
rs330304	0.88[JPT][hapmap]
rs330305	0.81[JPT][hapmap]
rs330330	1.00[CHB][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs330333	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35555190	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4344834	0.94[JPT][hapmap]
rs7241043	0.89[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:30251800-30262000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr18:30252200-30277200	Weak transcription	Spleen	Spleen
3	chr18:30252800-30262000	Strong transcription	Primary B cells from peripheral blood	blood
4	chr18:30253200-30267200	Strong transcription	HepG2	liver
5	chr18:30253200-30275400	Strong transcription	Primary B cells from cord blood	blood
6	chr18:30254600-30260000	Weak transcription	Fetal Kidney	kidney

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