Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1517129	0.88[CEU][hapmap];0.80[EUR][1000 genomes]
rs17467559	0.88[CEU][hapmap]
rs1980177	0.91[CEU][hapmap];0.87[EUR][1000 genomes]
rs2243700	0.88[CEU][hapmap];0.84[EUR][1000 genomes]
rs2243702	0.85[CEU][hapmap];0.84[EUR][1000 genomes]
rs2246592	0.81[EUR][1000 genomes]
rs2255882	0.90[CEU][hapmap];0.83[EUR][1000 genomes]
rs2591010	0.88[CEU][hapmap];0.83[EUR][1000 genomes]
rs2591014	0.90[CEU][hapmap];0.83[EUR][1000 genomes]
rs2591019	0.90[CEU][hapmap];0.80[EUR][1000 genomes]
rs2591020	0.80[EUR][1000 genomes]
rs2591021	0.88[CEU][hapmap];0.81[EUR][1000 genomes]
rs2591022	0.86[EUR][1000 genomes]
rs2591024	0.90[CEU][hapmap];0.81[EUR][1000 genomes]
rs2591025	0.89[CEU][hapmap];0.87[EUR][1000 genomes]
rs2676632	0.81[EUR][1000 genomes]
rs2676633	0.89[CEU][hapmap];0.86[EUR][1000 genomes]
rs2676634	0.82[EUR][1000 genomes]
rs2676649	0.80[EUR][1000 genomes]
rs2676650	0.90[CEU][hapmap]
rs2676651	0.81[EUR][1000 genomes]
rs2676653	0.81[EUR][1000 genomes]
rs2676654	0.90[CEU][hapmap];0.83[EUR][1000 genomes]
rs2676655	0.84[EUR][1000 genomes]
rs2676656	0.83[EUR][1000 genomes]
rs2944715	0.91[CEU][hapmap];0.82[EUR][1000 genomes]
rs6991082	0.80[CEU][hapmap]
rs814440	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs814455	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1028889	chr8:69026806-69308725	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv948687	chr8:69041121-69642540	Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	esv3390889	chr8:69264948-69266946	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
4	nsv1031040	chr8:69265471-69315554	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:69265200-69267400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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