Variant report

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10239550	0.88[ASN][1000 genomes]
rs10264424	0.91[ASN][1000 genomes]
rs12112534	0.89[ASN][1000 genomes]
rs1304809	0.95[ASN][1000 genomes]
rs13230403	0.82[EUR][1000 genomes]
rs1479847	0.97[ASN][1000 genomes]
rs1585815	0.96[ASN][1000 genomes]
rs1842275	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2620438	0.97[ASN][1000 genomes]
rs2620475	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2697452	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2697453	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28430910	0.83[EUR][1000 genomes]
rs700306	0.88[ASN][1000 genomes]
rs700311	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs700312	0.86[ASN][1000 genomes]
rs700313	0.85[ASN][1000 genomes]
rs826645	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs826646	0.95[ASN][1000 genomes]
rs826647	0.97[ASN][1000 genomes]
rs826649	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs826650	0.98[ASN][1000 genomes]
rs826651	0.98[ASN][1000 genomes]
rs826655	0.87[ASN][1000 genomes]
rs826656	0.86[ASN][1000 genomes]
rs826657	0.86[ASN][1000 genomes]
rs826658	0.85[ASN][1000 genomes]
rs826659	0.86[ASN][1000 genomes]
rs826660	0.86[ASN][1000 genomes]
rs826661	0.86[ASN][1000 genomes]
rs826662	0.86[ASN][1000 genomes]
rs826663	0.86[ASN][1000 genomes]
rs826664	0.86[ASN][1000 genomes]
rs826812	0.85[ASN][1000 genomes]
rs826813	0.88[ASN][1000 genomes]
rs826814	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
2	nsv608954	chr7:147104887-147145576	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
3	nsv1024540	chr7:147105149-147138125	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147095400-147120800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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