Variant report

Variant rs852536
Chromosome Location chr7:5594385-5594386
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5572600-5594600 Weak transcription Right Atrium heart
2 chr7:5588800-5595000 Enhancers Placenta Placenta
3 chr7:5589000-5594400 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr7:5589400-5594400 Weak transcription HUVEC blood vessel
5 chr7:5589400-5595000 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr7:5589400-5595200 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr7:5589600-5594400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr7:5589600-5594400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr7:5589600-5594400 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr7:5589600-5594400 Weak transcription NHDF-Ad bronchial
11 chr7:5589600-5594600 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr7:5589600-5594800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr7:5589600-5595000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr7:5589600-5595000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr7:5589600-5595200 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr7:5589800-5594400 Weak transcription Muscle Satellite Cultured Cells --
17 chr7:5590600-5594400 Weak transcription Gastric stomach
18 chr7:5591600-5595000 Enhancers Fetal Intestine Large intestine
19 chr7:5591800-5594400 Enhancers Colonic Mucosa Colon
20 chr7:5591800-5595000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr7:5592400-5594400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
22 chr7:5592400-5594600 Flanking Active TSS Hela-S3 cervix
23 chr7:5592400-5595000 Enhancers Liver Liver
24 chr7:5592600-5594800 Enhancers Rectal Mucosa Donor 31 rectum
25 chr7:5592600-5595000 Enhancers Stomach Mucosa stomach
26 chr7:5592800-5594400 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr7:5592800-5594600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr7:5593000-5594400 Enhancers Primary monocytes fromperipheralblood blood
29 chr7:5593000-5595000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr7:5593000-5595000 Enhancers Rectal Mucosa Donor 29 rectum
31 chr7:5593000-5595000 Enhancers NHEK skin
32 chr7:5593200-5594400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr7:5593200-5594400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr7:5593200-5594400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
35 chr7:5593200-5595200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr7:5593400-5594400 Enhancers HepG2 liver
37 chr7:5593400-5594400 Weak transcription HMEC breast
38 chr7:5593400-5595000 Weak transcription HSMM muscle
39 chr7:5593400-5595200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr7:5593600-5594400 Enhancers Fetal Muscle Leg muscle
41 chr7:5593600-5595000 Weak transcription HSMMtube muscle
42 chr7:5593800-5594400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
43 chr7:5593800-5594600 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr7:5594000-5594400 Enhancers Primary hematopoietic stem cells short term culture blood
45 chr7:5594000-5594400 Enhancers Colon Smooth Muscle Colon
46 chr7:5594000-5594400 Enhancers Fetal Intestine Small intestine
47 chr7:5594000-5594400 Bivalent Enhancer Fetal Muscle Trunk muscle
48 chr7:5594000-5594600 Flanking Active TSS Rectal Smooth Muscle rectum
49 chr7:5594000-5595000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr7:5594000-5595000 Enhancers Primary T cells fromperipheralblood blood

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