Variant report

Variant rs852523
Chromosome Location chr7:5692486-5692487
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5660600-5693800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr7:5674800-5693600 Strong transcription Dnd41 blood
3 chr7:5674800-5728200 Weak transcription Small Intestine intestine
4 chr7:5676000-5693800 Strong transcription Fetal Intestine Small intestine
5 chr7:5677000-5693400 Weak transcription Right Atrium heart
6 chr7:5677000-5701400 Weak transcription Fetal Brain Male brain
7 chr7:5677200-5707200 Weak transcription Stomach Mucosa stomach
8 chr7:5677400-5706200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr7:5677600-5693600 Strong transcription Stomach Smooth Muscle stomach
10 chr7:5677600-5694000 Strong transcription Fetal Stomach stomach
11 chr7:5679200-5706000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr7:5679400-5701600 Weak transcription Fetal Heart heart
13 chr7:5679800-5692800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr7:5682400-5692800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr7:5683400-5697600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr7:5683600-5693000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr7:5683600-5693800 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr7:5683600-5710400 Weak transcription Colonic Mucosa Colon
19 chr7:5684000-5693200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr7:5684800-5692800 Strong transcription Primary T cells from cord blood blood
21 chr7:5684800-5692800 Strong transcription Primary T regulatory cells fromperipheralblood blood
22 chr7:5684800-5694000 Strong transcription Primary T cells fromperipheralblood blood
23 chr7:5685000-5692800 Strong transcription Primary T helper cells fromperipheralblood blood
24 chr7:5685000-5693000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr7:5685000-5694000 Strong transcription Primary hematopoietic stem cells short term culture blood
26 chr7:5685200-5693000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
27 chr7:5685200-5693800 Strong transcription Primary T helper cells PMA-I stimulated --
28 chr7:5685600-5692800 Strong transcription Fetal Thymus thymus
29 chr7:5685800-5693000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr7:5685800-5693800 Strong transcription Primary T helper naive cells fromperipheralblood blood
31 chr7:5686200-5693000 Strong transcription Fetal Muscle Trunk muscle
32 chr7:5686400-5693000 Strong transcription Rectal Mucosa Donor 29 rectum
33 chr7:5686400-5693200 Strong transcription Fetal Adrenal Gland Adrenal Gland
34 chr7:5687000-5692600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr7:5687200-5692800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr7:5687600-5693000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
37 chr7:5687600-5693400 Weak transcription HMEC breast
38 chr7:5687800-5693000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr7:5688400-5692600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr7:5688400-5692600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr7:5688400-5692800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr7:5688400-5692800 Strong transcription Primary hematopoietic stem cells blood
43 chr7:5688400-5692800 Strong transcription NH-A brain
44 chr7:5688400-5693000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr7:5688400-5693400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr7:5688400-5693800 Strong transcription HSMM muscle
47 chr7:5688400-5694000 Strong transcription GM12878-XiMat blood
48 chr7:5688600-5693000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr7:5688600-5693000 Strong transcription HepG2 liver
50 chr7:5688600-5693800 Strong transcription Breast Myoepithelial Primary Cells Breast

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