Variant report

Variant rs10271741
Chromosome Location chr7:5815369-5815370
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5762000-5820400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr7:5781400-5816800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr7:5784000-5819600 Weak transcription Fetal Heart heart
4 chr7:5790800-5820400 Weak transcription Placenta Amnion Placenta Amnion
5 chr7:5792600-5816600 Weak transcription Right Ventricle heart
6 chr7:5792800-5820000 Weak transcription Fetal Kidney kidney
7 chr7:5792800-5820200 Weak transcription H1 Cell Line embryonic stem cell
8 chr7:5792800-5820200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr7:5792800-5820200 Weak transcription H9 Cell Line embryonic stem cell
10 chr7:5798800-5818800 Weak transcription Brain Germinal Matrix brain
11 chr7:5798800-5820400 Weak transcription Esophagus oesophagus
12 chr7:5799200-5816600 Weak transcription Fetal Brain Female brain
13 chr7:5799200-5819000 Weak transcription Fetal Brain Male brain
14 chr7:5799200-5819600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr7:5799200-5820200 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr7:5799600-5820200 Weak transcription Thymus Thymus
17 chr7:5799800-5816600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr7:5800200-5818200 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr7:5800400-5815400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr7:5800400-5816200 Weak transcription Fetal Intestine Large intestine
21 chr7:5800400-5816600 Weak transcription Spleen Spleen
22 chr7:5800400-5816800 Weak transcription Placenta Placenta
23 chr7:5800400-5819600 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr7:5800600-5816600 Weak transcription Duodenum Mucosa Duodenum
25 chr7:5800600-5819000 Weak transcription Brain Substantia Nigra brain
26 chr7:5800600-5819600 Weak transcription Liver Liver
27 chr7:5807000-5817600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr7:5807000-5820400 Weak transcription Aorta Aorta
29 chr7:5807200-5816800 Weak transcription Brain Angular Gyrus brain
30 chr7:5807200-5816800 Weak transcription Brain Hippocampus Middle brain
31 chr7:5807200-5818800 Weak transcription Brain Anterior Caudate brain
32 chr7:5807400-5819600 Weak transcription Brain Inferior Temporal Lobe brain
33 chr7:5807400-5819600 Weak transcription HSMMtube muscle
34 chr7:5807600-5816800 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr7:5807800-5816800 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr7:5808000-5816600 Weak transcription Ovary ovary
37 chr7:5808000-5817600 Weak transcription Pancreas Pancrea
38 chr7:5808200-5816800 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr7:5808200-5816800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr7:5808200-5819000 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr7:5808200-5819000 Weak transcription Brain Cingulate Gyrus brain
42 chr7:5808200-5820400 Weak transcription Gastric stomach
43 chr7:5810000-5816600 Weak transcription Lung lung
44 chr7:5810800-5818800 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr7:5811400-5820200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
46 chr7:5812800-5815400 Enhancers Primary T helper 17 cells PMA-I stimulated --
47 chr7:5812800-5815600 Weak transcription Fetal Lung lung
48 chr7:5812800-5818600 Enhancers Primary T killer naive cells fromperipheralblood blood
49 chr7:5813000-5817000 Enhancers Primary T killer memory cells from peripheral blood blood
50 chr7:5813000-5819200 Strong transcription Fetal Stomach stomach

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