Variant report

Variant rs852401
Chromosome Location chr7:5717790-5717791
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5674800-5728200 Weak transcription Small Intestine intestine
2 chr7:5691200-5721000 Weak transcription Pancreas Pancrea
3 chr7:5699200-5723000 Weak transcription H9 Cell Line embryonic stem cell
4 chr7:5702000-5730600 Weak transcription Placenta Amnion Placenta Amnion
5 chr7:5702400-5721400 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr7:5702600-5718000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr7:5702800-5727200 Weak transcription Psoas Muscle Psoas
8 chr7:5707600-5719000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr7:5707600-5721000 Weak transcription Stomach Mucosa stomach
10 chr7:5707800-5718000 Weak transcription K562 blood
11 chr7:5710600-5718200 Weak transcription Lung lung
12 chr7:5710800-5721200 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr7:5712600-5719200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr7:5713000-5730200 Weak transcription Gastric stomach
15 chr7:5713200-5718000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr7:5713200-5718200 Weak transcription Dnd41 blood
17 chr7:5713200-5718800 Weak transcription Thymus Thymus
18 chr7:5713200-5719000 Weak transcription Esophagus oesophagus
19 chr7:5713200-5721400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr7:5713200-5724000 Weak transcription Brain Germinal Matrix brain
21 chr7:5713400-5720600 Weak transcription HepG2 liver
22 chr7:5713600-5717800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr7:5714000-5719200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr7:5715400-5723200 Enhancers Adipose Nuclei Adipose
25 chr7:5716000-5718600 Enhancers Right Ventricle heart
26 chr7:5716000-5719000 Enhancers Left Ventricle heart
27 chr7:5716000-5720000 Enhancers Rectal Smooth Muscle rectum
28 chr7:5716000-5720600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr7:5716200-5718200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr7:5716200-5718400 Enhancers HUVEC blood vessel
31 chr7:5716200-5719800 Genic enhancers Fetal Stomach stomach
32 chr7:5716200-5721800 Enhancers Right Atrium heart
33 chr7:5716400-5717800 Enhancers ES-I3 Cell Line embryonic stem cell
34 chr7:5716400-5717800 Enhancers HUES48 Cell Line embryonic stem cell
35 chr7:5716400-5718200 Enhancers HUES6 Cell Line embryonic stem cell
36 chr7:5716400-5719000 Enhancers GM12878-XiMat blood
37 chr7:5716400-5719600 Weak transcription H1 Cell Line embryonic stem cell
38 chr7:5716400-5722000 Enhancers Fetal Heart heart
39 chr7:5716600-5717800 Enhancers NHEK skin
40 chr7:5716600-5718000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
41 chr7:5716600-5718000 Enhancers HMEC breast
42 chr7:5716600-5718400 Enhancers Breast Myoepithelial Primary Cells Breast
43 chr7:5716600-5718800 Enhancers Fetal Adrenal Gland Adrenal Gland
44 chr7:5716600-5719200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr7:5716600-5719800 Enhancers Duodenum Smooth Muscle Duodenum
46 chr7:5716600-5722400 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr7:5716800-5717800 Enhancers Rectal Mucosa Donor 31 rectum
48 chr7:5716800-5717800 Genic enhancers HSMM muscle
49 chr7:5716800-5718200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr7:5716800-5718200 Enhancers Brain Cingulate Gyrus brain

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