Variant report

Variant rs3943984
Chromosome Location chr7:5765638-5765639
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5723400-5766400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr7:5737400-5767200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr7:5737600-5774200 Strong transcription Dnd41 blood
4 chr7:5739600-5769600 Strong transcription Fetal Intestine Large intestine
5 chr7:5744200-5766600 Weak transcription Stomach Mucosa stomach
6 chr7:5744200-5769400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr7:5744600-5769400 Strong transcription Primary T cells from cord blood blood
8 chr7:5744600-5769600 Strong transcription Fetal Muscle Trunk muscle
9 chr7:5744800-5769200 Strong transcription Fetal Muscle Leg muscle
10 chr7:5744800-5769600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr7:5745000-5769200 Strong transcription Sigmoid Colon Sigmoid Colon
12 chr7:5745000-5769800 Strong transcription Liver Liver
13 chr7:5746000-5769600 Strong transcription Rectal Mucosa Donor 29 rectum
14 chr7:5746000-5770400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr7:5746000-5771200 Strong transcription Primary T helper cells fromperipheralblood blood
16 chr7:5747400-5769200 Strong transcription Fetal Stomach stomach
17 chr7:5747400-5769400 Strong transcription Fetal Adrenal Gland Adrenal Gland
18 chr7:5747400-5769600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
19 chr7:5747600-5769600 Strong transcription Primary T cells fromperipheralblood blood
20 chr7:5748200-5769600 Strong transcription A549 lung
21 chr7:5749200-5769800 Strong transcription Adipose Nuclei Adipose
22 chr7:5749800-5769200 Strong transcription Stomach Smooth Muscle stomach
23 chr7:5753200-5794400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr7:5754000-5769200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr7:5755000-5767800 Weak transcription Colonic Mucosa Colon
26 chr7:5755000-5780800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr7:5757000-5769400 Strong transcription Cortex derived primary cultured neurospheres brain
28 chr7:5757000-5769800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr7:5758400-5768400 Strong transcription Left Ventricle heart
30 chr7:5758400-5769200 Strong transcription Thymus Thymus
31 chr7:5758400-5770200 Strong transcription Fetal Thymus thymus
32 chr7:5758600-5769000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr7:5758800-5765800 Strong transcription H1 Cell Line embryonic stem cell
34 chr7:5758800-5767200 Strong transcription HUES48 Cell Line embryonic stem cell
35 chr7:5758800-5769000 Strong transcription Brain Angular Gyrus brain
36 chr7:5758800-5769200 Strong transcription Osteobl bone
37 chr7:5758800-5769600 Strong transcription Primary B cells from peripheral blood blood
38 chr7:5758800-5769600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
39 chr7:5758800-5769800 Strong transcription iPS-18 Cell Line embryonic stem cell
40 chr7:5758800-5769800 Strong transcription Primary T helper naive cells fromperipheralblood blood
41 chr7:5758800-5770000 Strong transcription Primary T helper cells PMA-I stimulated --
42 chr7:5758800-5770200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr7:5758800-5770800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr7:5758800-5770800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr7:5758800-5771000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
46 chr7:5759000-5769000 Strong transcription Fetal Brain Female brain
47 chr7:5759000-5769600 Strong transcription NH-A brain
48 chr7:5759000-5770200 Strong transcription Duodenum Smooth Muscle Duodenum
49 chr7:5759200-5770000 Strong transcription Duodenum Mucosa Duodenum
50 chr7:5759400-5769400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood

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