Variant report

Variant rs852419
Chromosome Location chr7:5701664-5701665
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5674800-5728200 Weak transcription Small Intestine intestine
2 chr7:5677200-5707200 Weak transcription Stomach Mucosa stomach
3 chr7:5677400-5706200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr7:5679200-5706000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr7:5683600-5710400 Weak transcription Colonic Mucosa Colon
6 chr7:5689800-5704000 Weak transcription Fetal Brain Female brain
7 chr7:5690200-5704000 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr7:5690200-5706000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr7:5690400-5702400 Weak transcription Psoas Muscle Psoas
10 chr7:5690600-5704200 Weak transcription H1 Cell Line embryonic stem cell
11 chr7:5690600-5704200 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr7:5690800-5704000 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr7:5691000-5712000 Weak transcription Fetal Kidney kidney
14 chr7:5691200-5721000 Weak transcription Pancreas Pancrea
15 chr7:5692200-5704000 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr7:5692600-5717400 Weak transcription Hela-S3 cervix
17 chr7:5692800-5702000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr7:5692800-5702200 Weak transcription Lung lung
19 chr7:5695400-5703800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr7:5695400-5703800 Strong transcription Fetal Stomach stomach
21 chr7:5695400-5704200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr7:5695400-5704600 Strong transcription Fetal Intestine Small intestine
23 chr7:5696000-5703000 Strong transcription Cortex derived primary cultured neurospheres brain
24 chr7:5697800-5704200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr7:5699200-5702000 Weak transcription Gastric stomach
26 chr7:5699200-5723000 Weak transcription H9 Cell Line embryonic stem cell
27 chr7:5700200-5702800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr7:5700200-5702800 Strong transcription Muscle Satellite Cultured Cells --
29 chr7:5700200-5703000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr7:5700200-5704200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr7:5700400-5702600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr7:5700400-5702600 Strong transcription Duodenum Smooth Muscle Duodenum
33 chr7:5700400-5702600 Strong transcription NH-A brain
34 chr7:5700400-5702800 Strong transcription Colon Smooth Muscle Colon
35 chr7:5700600-5702200 Strong transcription A549 lung
36 chr7:5700600-5703000 Strong transcription Fetal Intestine Large intestine
37 chr7:5700600-5703000 Strong transcription HepG2 liver
38 chr7:5700600-5703800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr7:5700800-5701800 Enhancers Brain Hippocampus Middle brain
40 chr7:5700800-5701800 Genic enhancers Brain Substantia Nigra brain
41 chr7:5700800-5702200 Strong transcription Osteobl bone
42 chr7:5700800-5702800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr7:5700800-5702800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr7:5700800-5702800 Enhancers Primary hematopoietic stem cells blood
45 chr7:5700800-5702800 Enhancers Primary Natural Killer cells fromperipheralblood blood
46 chr7:5700800-5702800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr7:5700800-5702800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr7:5700800-5702800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr7:5700800-5702800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr7:5700800-5702800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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