The 2.0 version of rSNPBase

Variant report

Variant rs852416
Chromosome Location chr7:5705630-5705631
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5674800-5728200 Weak transcription Small Intestine intestine
2 chr7:5677200-5707200 Weak transcription Stomach Mucosa stomach
3 chr7:5677400-5706200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr7:5679200-5706000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr7:5683600-5710400 Weak transcription Colonic Mucosa Colon
6 chr7:5690200-5706000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr7:5691000-5712000 Weak transcription Fetal Kidney kidney
8 chr7:5691200-5721000 Weak transcription Pancreas Pancrea
9 chr7:5692600-5717400 Weak transcription Hela-S3 cervix
10 chr7:5699200-5723000 Weak transcription H9 Cell Line embryonic stem cell
11 chr7:5701600-5706000 Weak transcription Placenta Placenta
12 chr7:5702000-5717600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr7:5702000-5730600 Weak transcription Placenta Amnion Placenta Amnion
14 chr7:5702200-5707200 Weak transcription Rectal Smooth Muscle rectum
15 chr7:5702400-5707200 Weak transcription Left Ventricle heart
16 chr7:5702400-5707200 Weak transcription Right Ventricle heart
17 chr7:5702400-5708600 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr7:5702400-5710400 Weak transcription NHEK skin
19 chr7:5702400-5712600 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr7:5702400-5717000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr7:5702400-5721400 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr7:5702600-5706000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr7:5702600-5707200 Weak transcription HSMMtube muscle
24 chr7:5702600-5708200 Weak transcription NH-A brain
25 chr7:5702600-5710400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr7:5702600-5711600 Weak transcription Right Atrium heart
27 chr7:5702600-5717200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr7:5702600-5717200 Weak transcription Aorta Aorta
29 chr7:5702600-5717400 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr7:5702600-5717600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr7:5702600-5718000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr7:5702800-5706000 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr7:5702800-5706000 Weak transcription HUVEC blood vessel
34 chr7:5702800-5706200 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr7:5702800-5707000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr7:5702800-5707000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr7:5702800-5707000 Weak transcription Primary hematopoietic stem cells blood
38 chr7:5702800-5707000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr7:5702800-5707000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr7:5702800-5707000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr7:5702800-5707000 Weak transcription Spleen Spleen
42 chr7:5702800-5707200 Weak transcription Primary B cells from peripheral blood blood
43 chr7:5702800-5707200 Weak transcription Liver Liver
44 chr7:5702800-5707200 Weak transcription Gastric stomach
45 chr7:5702800-5707200 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr7:5702800-5707200 Weak transcription Thymus Thymus
47 chr7:5702800-5707400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr7:5702800-5707400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr7:5702800-5707400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr7:5702800-5707400 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015