Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:172615017..172617201-chr1:172680481..172683033,2	MCF-7	breast:
2	chr1:172676899..172680386-chr1:172681123..172684059,4	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1102704	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1102706	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1102707	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12136569	0.84[EUR][1000 genomes]
rs704845	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs859618	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs859619	0.94[ASN][1000 genomes]
rs859621	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs859622	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs859631	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs859633	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs859634	0.84[EUR][1000 genomes]
rs859636	0.84[EUR][1000 genomes]
rs859637	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs859638	0.84[EUR][1000 genomes]
rs859639	0.84[EUR][1000 genomes]
rs859641	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs859643	0.84[EUR][1000 genomes]
rs859644	0.84[EUR][1000 genomes]
rs859647	0.87[EUR][1000 genomes]
rs859648	0.87[EUR][1000 genomes]
rs859673	0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172674400-172683000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr1:172674400-172683000	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr1:172678200-172683000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr1:172678400-172685800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
5	chr1:172679000-172685400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
6	chr1:172679000-172685400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
7	chr1:172681000-172685400	Weak transcription	Primary T helper cells PMA-I stimulated	--
8	chr1:172682800-172683000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr1:172682800-172683000	Enhancers	NHEK	skin
10	chr1:172682800-172684200	Enhancers	iPS-18 Cell Line	embryonic stem cell

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