Variant report

Variant	rs859669
Chromosome Location	chr1:172671704-172671705
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs12119745	0.84[ASN][1000 genomes]
rs12120752	0.84[ASN][1000 genomes]
rs12131725	0.92[ASN][1000 genomes]
rs12139044	0.84[ASN][1000 genomes]
rs12144816	0.84[ASN][1000 genomes]
rs4916193	0.92[ASN][1000 genomes]
rs704843	0.84[ASN][1000 genomes]
rs704844	0.84[ASN][1000 genomes]
rs859668	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs859670	0.92[ASN][1000 genomes]
rs859672	0.84[ASN][1000 genomes]

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172655800-172673800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr1:172665200-172674200	Enhancers	Primary T cells fromperipheralblood	blood
3	chr1:172665200-172674200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
4	chr1:172665200-172675000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
5	chr1:172665600-172672200	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr1:172666200-172675600	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr1:172667400-172673800	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr1:172667400-172674600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
9	chr1:172668600-172675000	Enhancers	Primary T cells from cord blood	blood
10	chr1:172669000-172673000	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr1:172669200-172673000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
12	chr1:172669200-172673000	Enhancers	Primary T helper cells PMA-I stimulated	--
13	chr1:172669200-172673000	Enhancers	Primary T killer memory cells from peripheral blood	blood
14	chr1:172669200-172674400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
15	chr1:172669200-172674600	Enhancers	Primary T helper cells fromperipheralblood	blood
16	chr1:172669400-172673400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr1:172669400-172673400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr1:172669400-172674400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr1:172669400-172679000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
20	chr1:172669600-172671800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr1:172669600-172672800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
22	chr1:172669600-172673200	Weak transcription	Primary monocytes fromperipheralblood	blood
23	chr1:172669600-172673400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr1:172669600-172673600	Weak transcription	Primary B cells from peripheral blood	blood
25	chr1:172670000-172673000	Weak transcription	Primary hematopoietic stem cells	blood
26	chr1:172670600-172672800	Weak transcription	Dnd41	blood
27	chr1:172670600-172675200	Enhancers	Primary T helper naive cells from peripheral blood	blood
28	chr1:172671000-172673000	Weak transcription	Fetal Thymus	thymus
29	chr1:172671200-172671800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr1:172671200-172672000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood

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