The 2.0 version of rSNPBase

Variant report

Variant rs859670
Chromosome Location chr1:172673322-172673323
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172655800-172673800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:172665200-172674200 Enhancers Primary T cells fromperipheralblood blood
3 chr1:172665200-172674200 Enhancers Primary Natural Killer cells fromperipheralblood blood
4 chr1:172665200-172675000 Enhancers Primary T helper naive cells fromperipheralblood blood
5 chr1:172666200-172675600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
6 chr1:172667400-172673800 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:172667400-172674600 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr1:172668600-172675000 Enhancers Primary T cells from cord blood blood
9 chr1:172669200-172674400 Enhancers Primary T regulatory cells fromperipheralblood blood
10 chr1:172669200-172674600 Enhancers Primary T helper cells fromperipheralblood blood
11 chr1:172669400-172673400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr1:172669400-172673400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:172669400-172674400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr1:172669400-172679000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr1:172669600-172673400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:172669600-172673600 Weak transcription Primary B cells from peripheral blood blood
17 chr1:172670600-172675200 Enhancers Primary T helper naive cells from peripheral blood blood
18 chr1:172672600-172674400 Enhancers Primary hematopoietic stem cells short term culture blood
19 chr1:172672800-172673400 Enhancers HUES48 Cell Line embryonic stem cell
20 chr1:172672800-172673400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
21 chr1:172672800-172674400 Enhancers ES-I3 Cell Line embryonic stem cell
22 chr1:172672800-172674400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:172672800-172674400 Enhancers Primary mononuclear cells fromperipheralblood Blood
24 chr1:172672800-172674600 Enhancers Dnd41 blood
25 chr1:172673000-172674000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
26 chr1:172673000-172674200 Enhancers Primary hematopoietic stem cells blood
27 chr1:172673000-172674200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
28 chr1:172673000-172674200 Enhancers Fetal Thymus thymus
29 chr1:172673000-172674200 Enhancers Thymus Thymus
30 chr1:172673000-172674400 Enhancers HUES6 Cell Line embryonic stem cell
31 chr1:172673000-172674400 Enhancers HUES64 Cell Line embryonic stem cell
32 chr1:172673200-172673400 Enhancers Primary T killer memory cells from peripheral blood blood
33 chr1:172673200-172673800 Enhancers Primary monocytes fromperipheralblood blood
34 chr1:172673200-172673800 Enhancers Spleen Spleen
35 chr1:172673200-172674400 Enhancers iPS-15b Cell Line embryonic stem cell
36 chr1:172673200-172674600 Enhancers iPS-18 Cell Line embryonic stem cell
37 chr1:172673200-172674600 Enhancers iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015