Variant report

Variant	rs898939
Chromosome Location	chr14:84666749-84666750
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10133349	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10140107	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10142571	0.91[EUR][1000 genomes]
rs1031787	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11159633	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11844860	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12431743	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12878411	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12879881	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12881544	0.96[EUR][1000 genomes]
rs12881717	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1462339	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1466407	0.91[EUR][1000 genomes]
rs17119782	0.92[EUR][1000 genomes]
rs1779549	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs1779550	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1779552	0.88[EUR][1000 genomes]
rs2841157	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs28637508	0.90[EUR][1000 genomes]
rs3001377	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6574776	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6574777	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7148526	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7157884	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs734656	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs744740	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7493899	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs8004689	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs8004742	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs8004749	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs8021077	0.92[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv85516	chr14:84664110-84671508	Enhancers Weak transcription	lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84666400-84669600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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