The 2.0 version of rSNPBase

Variant report

Variant rs916366
Chromosome Location chr1:172791966-172791967
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172787400-172793800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
2 chr1:172787600-172793800 Enhancers NHDF-Ad bronchial
3 chr1:172788400-172793600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
4 chr1:172788400-172795400 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr1:172788800-172797000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr1:172789000-172792400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:172789000-172795400 Weak transcription Duodenum Mucosa Duodenum
8 chr1:172789000-172795400 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr1:172789000-172795400 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:172789000-172796600 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr1:172789000-172797000 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr1:172789400-172792600 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr1:172789400-172793800 Enhancers HSMM muscle
14 chr1:172789400-172795400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr1:172789600-172793800 Enhancers NHLF lung
16 chr1:172790000-172795200 Weak transcription Primary B cells from peripheral blood blood
17 chr1:172790200-172793800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr1:172790200-172794200 Enhancers Primary hematopoietic stem cells short term culture blood
19 chr1:172790200-172794400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr1:172790400-172792000 Enhancers K562 blood
21 chr1:172790400-172794000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:172790600-172795200 Weak transcription Primary B cells from cord blood blood
23 chr1:172790800-172792000 Enhancers Dnd41 blood
24 chr1:172790800-172795400 Weak transcription A549 lung
25 chr1:172791000-172792400 Weak transcription HSMMtube muscle
26 chr1:172791000-172792600 Weak transcription Lung lung
27 chr1:172791000-172795200 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr1:172791200-172792400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:172791200-172792400 Weak transcription Osteobl bone
30 chr1:172791200-172795200 Weak transcription Primary monocytes fromperipheralblood blood
31 chr1:172791200-172795400 Weak transcription Fetal Lung lung
32 chr1:172791200-172806200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:172791400-172792400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:172791400-172792400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:172791400-172792400 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:172791400-172792600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr1:172791400-172792800 Weak transcription Adipose Nuclei Adipose
38 chr1:172791400-172795400 Weak transcription Brain Hippocampus Middle brain
39 chr1:172791400-172795400 Weak transcription Placenta Amnion Placenta Amnion
40 chr1:172791800-172794000 Enhancers Primary neutrophils fromperipheralblood blood
41 chr1:172791800-172795200 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015