The 2.0 version of rSNPBase

Variant report

Variant rs923530
Chromosome Location chr11:46109519-46109520
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46063200-46119800 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr11:46071400-46114800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr11:46071400-46118800 Weak transcription Lung lung
4 chr11:46072000-46119400 Weak transcription Brain Angular Gyrus brain
5 chr11:46073800-46122200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr11:46079000-46128200 Weak transcription Aorta Aorta
7 chr11:46080400-46120800 Weak transcription Stomach Smooth Muscle stomach
8 chr11:46082000-46114000 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr11:46084800-46118600 Weak transcription Pancreas Pancrea
10 chr11:46085000-46119600 Weak transcription Brain Germinal Matrix brain
11 chr11:46085800-46111000 Weak transcription Placenta Amnion Placenta Amnion
12 chr11:46086600-46112200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
13 chr11:46087200-46120800 Weak transcription H1 Cell Line embryonic stem cell
14 chr11:46087600-46120400 Weak transcription HSMMtube muscle
15 chr11:46087600-46121000 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr11:46089600-46120400 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr11:46089800-46109600 Weak transcription Fetal Kidney kidney
18 chr11:46089800-46111400 Weak transcription Hela-S3 cervix
19 chr11:46092600-46112200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr11:46092800-46113200 Weak transcription Small Intestine intestine
21 chr11:46093400-46120000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr11:46094400-46118200 Weak transcription Ovary ovary
23 chr11:46094400-46119600 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr11:46094400-46120200 Weak transcription Brain Inferior Temporal Lobe brain
25 chr11:46094400-46128200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr11:46094600-46120800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr11:46095000-46121800 Weak transcription Fetal Intestine Small intestine
28 chr11:46096800-46120800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr11:46097200-46109800 Weak transcription NH-A brain
30 chr11:46097200-46111400 Weak transcription Colon Smooth Muscle Colon
31 chr11:46097200-46120800 Weak transcription Muscle Satellite Cultured Cells --
32 chr11:46097200-46121200 Weak transcription HUVEC blood vessel
33 chr11:46097400-46120800 Weak transcription HMEC breast
34 chr11:46097800-46120400 Weak transcription NHLF lung
35 chr11:46097800-46120400 Weak transcription Osteobl bone
36 chr11:46097800-46121000 Weak transcription NHEK skin
37 chr11:46098200-46118400 Weak transcription Psoas Muscle Psoas
38 chr11:46098400-46121200 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr11:46098600-46111200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr11:46098600-46120200 Weak transcription GM12878-XiMat blood
41 chr11:46098600-46120800 Weak transcription Fetal Brain Female brain
42 chr11:46098800-46110200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr11:46099200-46111200 Weak transcription Fetal Intestine Large intestine
44 chr11:46099400-46117600 Weak transcription K562 blood
45 chr11:46099400-46118400 Weak transcription Fetal Heart heart
46 chr11:46099600-46118600 Weak transcription Left Ventricle heart
47 chr11:46101200-46118200 Weak transcription Esophagus oesophagus
48 chr11:46101400-46111200 Weak transcription Placenta Placenta
49 chr11:46101400-46119400 Weak transcription Brain Cingulate Gyrus brain
50 chr11:46101400-46119600 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015