The 2.0 version of rSNPBase

Variant report

Variant rs9261548
Chromosome Location chr6:30160877-30160878
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30145000-30173800 Weak transcription Right Atrium heart
2 chr6:30148000-30173000 Weak transcription Fetal Heart heart
3 chr6:30150200-30163400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr6:30150600-30179200 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr6:30151600-30161400 Strong transcription Primary T cells from cord blood blood
6 chr6:30151800-30170400 Strong transcription Breast Myoepithelial Primary Cells Breast
7 chr6:30152000-30166400 Strong transcription Liver Liver
8 chr6:30152000-30168000 Strong transcription Fetal Intestine Large intestine
9 chr6:30152000-30168200 Strong transcription Primary T cells fromperipheralblood blood
10 chr6:30152000-30168200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
11 chr6:30152000-30168200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr6:30152000-30169000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr6:30152000-30170600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr6:30152000-30172400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr6:30152200-30167800 Strong transcription Primary monocytes fromperipheralblood blood
16 chr6:30152200-30167800 Strong transcription Primary B cells from peripheral blood blood
17 chr6:30152200-30168000 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr6:30152200-30168200 Strong transcription Primary T regulatory cells fromperipheralblood blood
19 chr6:30152200-30168200 Strong transcription Duodenum Mucosa Duodenum
20 chr6:30152200-30168600 Strong transcription Primary T helper cells fromperipheralblood blood
21 chr6:30152200-30169000 Strong transcription Duodenum Smooth Muscle Duodenum
22 chr6:30152400-30161000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr6:30152400-30167200 Strong transcription Primary neutrophils fromperipheralblood blood
24 chr6:30152400-30168800 Strong transcription Rectal Mucosa Donor 29 rectum
25 chr6:30152400-30169000 Strong transcription Adipose Nuclei Adipose
26 chr6:30152600-30166000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr6:30152800-30163000 Strong transcription HUES6 Cell Line embryonic stem cell
28 chr6:30153200-30169800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr6:30156000-30161800 Strong transcription GM12878-XiMat blood
30 chr6:30156600-30164600 Weak transcription HSMM muscle
31 chr6:30156800-30162800 Weak transcription NHDF-Ad bronchial
32 chr6:30156800-30174600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr6:30157000-30171800 Weak transcription ES-WA7 Cell Line embryonic stem cell
34 chr6:30157200-30162800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr6:30157200-30164600 Weak transcription Primary hematopoietic stem cells blood
36 chr6:30157600-30166600 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr6:30158200-30163000 Weak transcription Brain Cingulate Gyrus brain
38 chr6:30158200-30163200 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr6:30158200-30164200 Weak transcription HUVEC blood vessel
40 chr6:30158200-30173600 Weak transcription Psoas Muscle Psoas
41 chr6:30158400-30162800 Weak transcription Brain Substantia Nigra brain
42 chr6:30158400-30163200 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr6:30158400-30179600 Weak transcription Fetal Brain Male brain
44 chr6:30158600-30162800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr6:30158600-30164600 Weak transcription Muscle Satellite Cultured Cells --
46 chr6:30158800-30161600 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr6:30158800-30162800 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr6:30158800-30162800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr6:30158800-30164200 Weak transcription HMEC breast
50 chr6:30158800-30164800 Weak transcription Stomach Mucosa stomach

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Last update: Aug 31, 2015