The 2.0 version of rSNPBase

Variant report

Variant rs9292661
Chromosome Location chr5:37612196-37612197
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:37540000-37621000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr5:37555000-37616200 Weak transcription Aorta Aorta
3 chr5:37572200-37620600 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr5:37588800-37628000 Weak transcription Ovary ovary
5 chr5:37600000-37620600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr5:37600800-37627200 Weak transcription Fetal Intestine Small intestine
7 chr5:37601400-37614800 Weak transcription HSMM muscle
8 chr5:37601400-37618000 Weak transcription Primary T cells fromperipheralblood blood
9 chr5:37601600-37620800 Weak transcription Primary hematopoietic stem cells blood
10 chr5:37601600-37628600 Weak transcription Brain Hippocampus Middle brain
11 chr5:37601800-37614600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr5:37601800-37614800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr5:37601800-37620600 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr5:37602000-37630800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr5:37602200-37626200 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr5:37602800-37628000 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr5:37603000-37621800 Weak transcription Primary monocytes fromperipheralblood blood
18 chr5:37603600-37613400 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr5:37603600-37627600 Weak transcription Liver Liver
20 chr5:37603600-37628000 Weak transcription Thymus Thymus
21 chr5:37603800-37613400 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr5:37604000-37614200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr5:37604000-37627200 Weak transcription Lung lung
24 chr5:37604600-37618000 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr5:37604800-37612200 Weak transcription Small Intestine intestine
26 chr5:37604800-37625400 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr5:37604800-37630400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr5:37605000-37614800 Weak transcription Rectal Smooth Muscle rectum
29 chr5:37605000-37628800 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr5:37605400-37622600 Weak transcription Fetal Muscle Leg muscle
31 chr5:37605400-37628800 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr5:37606200-37614200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr5:37606200-37629000 Weak transcription Fetal Thymus thymus
34 chr5:37606400-37614200 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr5:37606400-37637800 Weak transcription Esophagus oesophagus
36 chr5:37606600-37615400 Weak transcription Colon Smooth Muscle Colon
37 chr5:37606600-37619200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr5:37607200-37628000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr5:37607800-37620800 Weak transcription GM12878-XiMat blood
40 chr5:37608200-37627200 Weak transcription Left Ventricle heart
41 chr5:37608400-37615400 Weak transcription Adipose Nuclei Adipose
42 chr5:37608400-37620400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr5:37608400-37621000 Weak transcription Primary B cells from peripheral blood blood
44 chr5:37608600-37620800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr5:37608600-37626600 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr5:37608800-37613800 Weak transcription Duodenum Mucosa Duodenum
47 chr5:37608800-37620600 Weak transcription Psoas Muscle Psoas
48 chr5:37609400-37627400 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr5:37609800-37620400 Weak transcription Primary B cells from cord blood blood
50 chr5:37610000-37614600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015