Variant report

Variant rs563999
Chromosome Location chr5:37534685-37534686
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:37489000-37548400 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr5:37496600-37541000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr5:37499200-37535800 Weak transcription Fetal Lung lung
4 chr5:37513600-37535800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr5:37518800-37537800 Weak transcription Dnd41 blood
6 chr5:37519600-37535600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr5:37519600-37541000 Weak transcription Primary B cells from peripheral blood blood
8 chr5:37519800-37534800 Weak transcription Right Ventricle heart
9 chr5:37519800-37535200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr5:37519800-37553600 Weak transcription Left Ventricle heart
11 chr5:37520000-37540400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr5:37520000-37541600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr5:37520800-37538400 Weak transcription Colon Smooth Muscle Colon
14 chr5:37521200-37541400 Weak transcription Liver Liver
15 chr5:37522400-37541000 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr5:37523400-37535800 Weak transcription Placenta Placenta
17 chr5:37523800-37553400 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr5:37525600-37541600 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr5:37528000-37535600 Weak transcription Spleen Spleen
20 chr5:37530400-37538400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr5:37532000-37535200 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr5:37532200-37535000 Weak transcription Brain Substantia Nigra brain
23 chr5:37532600-37534800 Weak transcription Brain Cingulate Gyrus brain
24 chr5:37533000-37539400 Weak transcription Rectal Smooth Muscle rectum
25 chr5:37533200-37541600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr5:37533400-37541200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr5:37533400-37546000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr5:37533600-37535600 Weak transcription Fetal Muscle Trunk muscle
29 chr5:37533800-37534800 Strong transcription Fetal Intestine Small intestine
30 chr5:37534000-37540800 Weak transcription Primary T cells fromperipheralblood blood
31 chr5:37534200-37536000 Weak transcription Thymus Thymus
32 chr5:37534200-37536400 Weak transcription Brain Anterior Caudate brain
33 chr5:37534200-37537200 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr5:37534200-37544200 Weak transcription Gastric stomach
35 chr5:37534200-37546000 Weak transcription Primary hematopoietic stem cells blood
36 chr5:37534400-37536000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr5:37534400-37536000 Weak transcription Duodenum Mucosa Duodenum
38 chr5:37534400-37536000 Weak transcription Fetal Brain Female brain
39 chr5:37534400-37536000 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr5:37534400-37536000 Weak transcription Stomach Smooth Muscle stomach
41 chr5:37534400-37536200 Weak transcription Adipose Nuclei Adipose
42 chr5:37534400-37536200 Weak transcription Ovary ovary
43 chr5:37534400-37538600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr5:37534400-37539200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr5:37534400-37539400 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr5:37534400-37539400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr5:37534400-37539400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr5:37534400-37541200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr5:37534400-37541400 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr5:37534400-37541800 Weak transcription Primary T helper cells fromperipheralblood blood

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