The 2.0 version of rSNPBase

Variant report

Variant rs9295842
Chromosome Location chr6:30280922-30280923
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30256200-30292000 Weak transcription Fetal Heart heart
2 chr6:30257600-30292800 Weak transcription Fetal Kidney kidney
3 chr6:30259000-30287200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr6:30262600-30292400 Weak transcription Pancreas Pancrea
5 chr6:30262800-30283200 Weak transcription NHLF lung
6 chr6:30262800-30290200 Weak transcription Spleen Spleen
7 chr6:30263000-30281400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr6:30263000-30282000 Weak transcription Psoas Muscle Psoas
9 chr6:30263000-30293000 Weak transcription Brain Substantia Nigra brain
10 chr6:30263200-30281600 Weak transcription Right Ventricle heart
11 chr6:30264200-30286600 Weak transcription Muscle Satellite Cultured Cells --
12 chr6:30264200-30289800 Weak transcription Gastric stomach
13 chr6:30264400-30285200 Weak transcription Colon Smooth Muscle Colon
14 chr6:30269200-30285800 Strong transcription Dnd41 blood
15 chr6:30270400-30283800 Weak transcription Colonic Mucosa Colon
16 chr6:30270600-30292600 Weak transcription Esophagus oesophagus
17 chr6:30270800-30281600 Weak transcription Fetal Lung lung
18 chr6:30270800-30292200 Weak transcription NHDF-Ad bronchial
19 chr6:30271000-30281000 Weak transcription Lung lung
20 chr6:30271000-30281600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr6:30271000-30292400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr6:30271000-30292800 Weak transcription Rectal Smooth Muscle rectum
23 chr6:30271400-30281000 Weak transcription Ovary ovary
24 chr6:30271400-30281400 Weak transcription Brain Anterior Caudate brain
25 chr6:30271400-30282200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr6:30271400-30291400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr6:30272200-30292200 Weak transcription Fetal Brain Male brain
28 chr6:30272400-30289600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr6:30273200-30281600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr6:30273400-30281000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr6:30273800-30281400 Weak transcription Brain Germinal Matrix brain
32 chr6:30274400-30285400 Strong transcription Primary B cells from cord blood blood
33 chr6:30274600-30281000 Weak transcription Aorta Aorta
34 chr6:30274600-30292200 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr6:30274600-30292600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr6:30275000-30281400 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr6:30275200-30286400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr6:30275400-30281400 Weak transcription Hela-S3 cervix
39 chr6:30275400-30286800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr6:30275400-30293400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr6:30276200-30284800 Strong transcription Primary T cells from cord blood blood
42 chr6:30276400-30283800 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr6:30276600-30285200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
44 chr6:30277000-30284200 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr6:30277000-30284800 Strong transcription Primary T cells fromperipheralblood blood
46 chr6:30277400-30284200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr6:30278200-30281400 Weak transcription A549 lung
48 chr6:30278200-30281600 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr6:30278200-30284000 Weak transcription Placenta Placenta
50 chr6:30278200-30292400 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015