The 2.0 version of rSNPBase

Variant report

Variant rs9296133
Chromosome Location chr6:34777533-34777534
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:34761400-34779200 Weak transcription Primary B cells from peripheral blood blood
2 chr6:34761400-34779600 Weak transcription Right Atrium heart
3 chr6:34761400-34784200 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr6:34761400-34787200 Weak transcription Fetal Muscle Leg muscle
5 chr6:34761400-34789400 Weak transcription Fetal Stomach stomach
6 chr6:34761400-34789400 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr6:34761400-34790800 Weak transcription H9 Cell Line embryonic stem cell
8 chr6:34761600-34784200 Weak transcription Primary B cells from cord blood blood
9 chr6:34761800-34784400 Weak transcription Primary hematopoietic stem cells blood
10 chr6:34761800-34784800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr6:34762000-34788400 Weak transcription Fetal Muscle Trunk muscle
12 chr6:34764000-34784400 Weak transcription Fetal Intestine Large intestine
13 chr6:34764000-34803800 Weak transcription HSMM muscle
14 chr6:34764200-34785000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr6:34764600-34787400 Weak transcription Liver Liver
16 chr6:34764800-34779000 Weak transcription Stomach Mucosa stomach
17 chr6:34765400-34782200 Weak transcription K562 blood
18 chr6:34766000-34784400 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr6:34766800-34778800 Weak transcription HepG2 liver
20 chr6:34771000-34778800 Weak transcription Fetal Intestine Small intestine
21 chr6:34772600-34789400 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr6:34773000-34778200 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr6:34773200-34778400 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr6:34773200-34791400 Weak transcription Gastric stomach
25 chr6:34773400-34779600 Weak transcription Psoas Muscle Psoas
26 chr6:34774400-34780800 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr6:34774800-34779200 Weak transcription Left Ventricle heart
28 chr6:34775200-34778200 Weak transcription Pancreas Pancrea
29 chr6:34775400-34777800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr6:34775400-34777800 Weak transcription A549 lung
31 chr6:34775400-34777800 Weak transcription GM12878-XiMat blood
32 chr6:34775400-34777800 Weak transcription NH-A brain
33 chr6:34775400-34778000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr6:34775400-34778000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr6:34775400-34778000 Weak transcription HMEC breast
36 chr6:34775400-34780400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr6:34775400-34787200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr6:34775400-34787200 Weak transcription Right Ventricle heart
39 chr6:34775400-34802400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr6:34775600-34777800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr6:34775600-34777800 Weak transcription NHEK skin
42 chr6:34775600-34778800 Weak transcription Fetal Heart heart
43 chr6:34775600-34780800 Weak transcription Adipose Nuclei Adipose
44 chr6:34776600-34789600 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr6:34777000-34779400 Enhancers Hela-S3 cervix
46 chr6:34777200-34778600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr6:34777400-34779400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
48 chr6:34777400-34779400 Enhancers HUVEC blood vessel

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Last update: Aug 31, 2015