Variant report

Variant	rs1051115
Chromosome Location	chr6:34855748-34855749
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SIN3AK20	chr6:34855603-34856225	HepG2	liver:	n/a	n/a
2	POLR2A	chr6:34855408-34856252	HUVEC	blood vessel:	n/a	n/a
3	GABPA	chr6:34855566-34856141	A549	lung:	n/a	n/a
4	MAX	chr6:34855506-34856165	SK-N-SH	brain:	n/a	n/a
5	CCNT2	chr6:34855577-34856270	K562	blood:	n/a	n/a
6	E2F4	chr6:34855672-34856236	Hela-S3	cervix:	n/a	chr6:34855937-34855944 chr6:34855933-34855945 chr6:34855934-34855948 chr6:34855842-34855851 chr6:34855937-34855944 chr6:34855937-34855944
7	BCLAF1	chr6:34855498-34856151	GM12878	blood:	n/a	n/a
8	FOS	chr6:34855698-34856008	MCF10A-Er-Src	breast:	n/a	chr6:34855841-34855850
9	POU2F2	chr6:34855672-34855905	GM12878	blood:	n/a	n/a
10	POLR2A	chr6:34855411-34856236	GM12878	blood:	n/a	n/a
11	YY1	chr6:34855510-34856069	SK-N-SH_RA	brain:	n/a	n/a
12	JUN	chr6:34855657-34856043	HepG2	liver:	n/a	chr6:34855840-34855853 chr6:34855841-34855850
13	SIN3AK20	chr6:34855633-34856099	A549	lung:	n/a	n/a
14	MAZ	chr6:34855006-34856455	IMR90	lung:	n/a	n/a
15	ELF1	chr6:34855444-34856006	GM12878	blood:	n/a	n/a
16	POLR2A	chr6:34855516-34856056	SK-N-SH	brain:	n/a	n/a
17	ATF3	chr6:34855553-34856043	K562	blood:	n/a	chr6:34855830-34855850 chr6:34855839-34855852 chr6:34855838-34855853
18	MXI1	chr6:34855437-34856242	HepG2	liver:	n/a	n/a
19	TEAD4	chr6:34855620-34856041	H1-hESC	embryonic stem cell:	n/a	n/a
20	JUN	chr6:34855688-34856164	K562	blood:	n/a	chr6:34855840-34855853 chr6:34855841-34855850
21	REST	chr6:34855520-34856250	A549	lung:	n/a	n/a
22	GABPA	chr6:34855558-34855973	K562	blood:	n/a	n/a
23	ZNF143	chr6:34855656-34856123	GM12878	blood:	n/a	n/a
24	POLR2A	chr6:34855559-34856371	HepG2	liver:	n/a	n/a
25	POLR2A	chr6:34855599-34856000	A549	lung:	n/a	n/a
26	JUND	chr6:34855666-34855883	H1-hESC	embryonic stem cell:	n/a	chr6:34855841-34855850
27	POLR2A	chr6:34855569-34857206	HCT-116	colon:	n/a	n/a
28	HEY1	chr6:34855531-34856166	K562	blood:	n/a	n/a
29	MYC	chr6:34855649-34855940	MCF-7	breast:	n/a	n/a
30	JUN	chr6:34854926-34857335	K562	blood:	n/a	chr6:34855840-34855853 chr6:34855841-34855850 chr6:34855452-34855460
31	GABPA	chr6:34855678-34855877	Hela-S3	cervix:	n/a	n/a
32	PAX5	chr6:34855677-34855981	GM12878	blood:	n/a	n/a
33	RAD21	chr6:34855625-34856065	SK-N-SH_RA	brain:	n/a	n/a
34	CEBPB	chr6:34855470-34856309	GM12878	blood:	n/a	n/a
35	SIN3AK20	chr6:34854889-34857925	MCF-7	breast:	n/a	n/a
36	E2F6	chr6:34855619-34856007	K562	blood:	n/a	chr6:34855937-34855944 chr6:34855933-34855945 chr6:34855934-34855948 chr6:34855842-34855851 chr6:34855937-34855944 chr6:34855937-34855944
37	MAFK	chr6:34855719-34856231	HepG2	liver:	n/a	n/a
38	ATF3	chr6:34855626-34856017	H1-hESC	embryonic stem cell:	n/a	chr6:34855830-34855850 chr6:34855839-34855852 chr6:34855838-34855853
39	ETS1	chr6:34855520-34856021	K562	blood:	n/a	chr6:34855819-34855828 chr6:34855816-34855829 chr6:34855814-34855828
40	GATA3	chr6:34855433-34856141	MCF-7	breast:	n/a	chr6:34855818-34855828
41	TCF7L2	chr6:34855576-34856143	Hela-S3	cervix:	n/a	n/a
42	POLR2A	chr6:34855495-34856184	GM12892	blood:	n/a	n/a
43	ELK4	chr6:34855581-34856158	Hela-S3	cervix:	n/a	chr6:34855817-34855828
44	SRF	chr6:34855618-34856016	GM12878	blood:	n/a	n/a
45	REST	chr6:34855722-34856014	SK-N-SH	brain:	n/a	n/a
46	MYC	chr6:34855406-34856295	NB4	blood:	n/a	n/a
47	TAF1	chr6:34855488-34856262	H1-hESC	embryonic stem cell:	n/a	n/a
48	SMC3	chr6:34855432-34856089	Hela-S3	cervix:	n/a	n/a
49	TFAP2C	chr6:34855404-34856076	Hela-S3	cervix:	n/a	chr6:34855770-34855785
50	ELF1	chr6:34855347-34856241	MCF-7	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr12:120729250..120730043-chr6:34855337..34856229,2	Hela-S3	cervix:
2	chr17:73285374..73286157-chr6:34855342..34855976,2	Hela-S3	cervix:
3	chr6:34854986..34858344-chr6:35226281..35229493,3	K562	blood:
4	chr3:156534879..156535549-chr6:34855191..34855795,2	Hela-S3	cervix:
5	chr6:34723520..34726444-chr6:34854512..34857469,3	MCF-7	breast:
6	chr6:34759044..34761297-chr6:34854138..34856970,2	K562	blood:
7	chr4:2419677..2420373-chr6:34855480..34855994,2	Hela-S3	cervix:
8	chr6:34855693..34857942-chr6:35191744..35194149,2	MCF-7	breast:
9	chr15:41913003..41913826-chr6:34855469..34856066,2	Hela-S3	cervix:
10	chr6:34855314..34856910-chr6:35435686..35437650,2	MCF-7	breast:
11	chr6:34758735..34762506-chr6:34853024..34858695,7	MCF-7	breast:
12	chr6:27798350..27799895-chr6:34855095..34857385,2	K562	blood:

Variant related genes	Relation type
ANKS1A	TF binding region
ENSG00000065029	Chromatin interaction
ENSG00000065060	Chromatin interaction
ENSG00000197914	Chromatin interaction
ENSG00000159733	Chromatin interaction
ENSG00000125454	Chromatin interaction
ENSG00000272374	Chromatin interaction
ENSG00000198755	Chromatin interaction
ENSG00000124562	Chromatin interaction
ENSG00000174197	Chromatin interaction
ENSG00000202538	Chromatin interaction

Extended variants
information (count: 148 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:129)

rs_ID	r²[population]
rs1018622	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10947536	0.85[YRI][hapmap]
rs11961041	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes]
rs11963234	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11966100	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11967912	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11968954	1.00[CEU][hapmap];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11968972	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12111129	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12212217	0.86[YRI][hapmap]
rs13193526	0.90[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs13195029	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13195361	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13195490	0.89[EUR][1000 genomes]
rs13196785	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13196983	0.82[EUR][1000 genomes]
rs13200792	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13205210	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13206245	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13207848	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs13208149	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13210470	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13212699	0.83[EUR][1000 genomes]
rs13213239	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13213288	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13213604	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13214596	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13215208	0.82[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs13216424	1.00[JPT][hapmap]
rs13219307	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13219624	0.82[YRI][hapmap]
rs16895659	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16896559	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs1737727	0.81[YRI][hapmap]
rs1747517	1.00[JPT][hapmap]
rs1880090	0.85[CHB][hapmap]
rs2140418	0.85[YRI][hapmap]
rs2177380	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs2177381	0.85[YRI][hapmap]
rs2273006	0.85[YRI][hapmap]
rs2293242	0.85[YRI][hapmap]
rs2296361	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2296362	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2395603	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2395605	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2473613	0.83[YRI][hapmap]
rs2504162	0.85[YRI][hapmap]
rs2762336	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs28360525	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2985	0.85[YRI][hapmap]
rs34261333	0.87[EUR][1000 genomes]
rs34355573	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34377413	0.88[EUR][1000 genomes]
rs34463942	0.88[EUR][1000 genomes]
rs34480956	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34681295	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34840245	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35081279	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35103554	0.83[EUR][1000 genomes]
rs35143960	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35186650	0.88[EUR][1000 genomes]
rs35195182	0.88[EUR][1000 genomes]
rs35203657	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35285054	0.80[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs35369977	0.88[EUR][1000 genomes]
rs35444671	0.84[EUR][1000 genomes]
rs35744142	0.88[EUR][1000 genomes]
rs35940001	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36026951	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3734261	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs3734266	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3800451	0.83[YRI][hapmap]
rs4438945	0.87[EUR][1000 genomes]
rs4646933	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6457792	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs6457796	0.85[CHB][hapmap];0.83[ASN][1000 genomes]
rs6457797	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6457798	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs66672772	0.88[EUR][1000 genomes]
rs66926909	0.87[EUR][1000 genomes]
rs67622212	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs67895864	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6904996	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6908462	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes]
rs6909393	0.83[EUR][1000 genomes]
rs6910824	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6914031	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6914351	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6918872	0.83[YRI][hapmap]
rs6925175	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6926373	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6932857	0.83[YRI][hapmap]
rs6934741	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6941453	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs71567467	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72892286	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72910111	0.83[EUR][1000 genomes]
rs72910167	0.86[EUR][1000 genomes]
rs7739385	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7743724	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7743949	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7749750	0.83[EUR][1000 genomes]
rs7755354	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7758743	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7759412	0.82[EUR][1000 genomes]
rs7759985	0.83[EUR][1000 genomes]
rs7761391	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7763989	0.82[EUR][1000 genomes]
rs7764126	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7775947	0.89[EUR][1000 genomes]
rs7776439	0.89[EUR][1000 genomes]
rs820062	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs820065	0.83[CHB][hapmap];0.90[JPT][hapmap]
rs820066	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs820069	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs820095	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs820099	1.00[JPT][hapmap]
rs820101	1.00[JPT][hapmap]
rs820103	0.81[JPT][hapmap]
rs847848	0.89[YRI][hapmap]
rs912717	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9296133	0.92[ASN][1000 genomes]
rs9296139	0.82[YRI][hapmap]
rs9357188	0.83[YRI][hapmap]
rs9462003	0.81[EUR][1000 genomes]
rs9462027	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs9469852	0.83[EUR][1000 genomes]
rs9469904	0.95[ASN][1000 genomes]
rs9968782	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:19 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022844	chr6:34317219-35060519	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
2	nsv538195	chr6:34317219-35060519	Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
3	nsv885785	chr6:34404636-34874002	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
4	nsv885793	chr6:34520267-34886436	Active TSS Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
5	esv2763967	chr6:34566255-34925463	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
6	nsv1020710	chr6:34607214-34890143	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
7	nsv870010	chr6:34713359-34880048	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	33 gene(s)	inside rSNPs	diseases
8	nsv1025374	chr6:34723723-34887316	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	33 gene(s)	inside rSNPs	diseases
9	nsv462905	chr6:34728253-34886436	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	30 gene(s)	inside rSNPs	diseases
10	nsv602906	chr6:34728253-34886436	Strong transcription Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	30 gene(s)	inside rSNPs	diseases
11	nsv1028363	chr6:34733071-34859045	Weak transcription Active TSS Strong transcription Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	30 gene(s)	inside rSNPs	diseases
12	nsv1015792	chr6:34741917-34887316	Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	30 gene(s)	inside rSNPs	diseases
13	nsv1021733	chr6:34751052-34887316	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region miRNA target site	30 gene(s)	inside rSNPs	diseases
14	nsv1026121	chr6:34786887-34961360	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA target site	19 gene(s)	inside rSNPs	diseases
15	nsv885797	chr6:34791027-34980601	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA target site	18 gene(s)	inside rSNPs	diseases
16	nsv1033135	chr6:34802652-34957093	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA target site	18 gene(s)	inside rSNPs	diseases
17	nsv508402	chr6:34840961-34951288	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA target site	17 gene(s)	inside rSNPs	diseases
18	esv1811041	chr6:34851134-34856501	Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	15 gene(s)	inside rSNPs	n/a
19	esv1802115	chr6:34852176-34856501	Weak transcription Flanking Active TSS Active TSS Genic enhancers Enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	15 gene(s)	inside rSNPs	n/a

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs1051115	UHRF1BP1	cis	Muscle Skeletal	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:34854200-34858200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr6:34854400-34858200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr6:34854400-34858200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr6:34854400-34858200	Active TSS	K562	blood
5	chr6:34854400-34859200	Active TSS	HUES48 Cell Line	embryonic stem cell
6	chr6:34854600-34855800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
7	chr6:34854600-34856600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr6:34854600-34858000	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr6:34854600-34858200	Active TSS	H1 Cell Line	embryonic stem cell
10	chr6:34854600-34858200	Active TSS	iPS-15b Cell Line	embryonic stem cell
11	chr6:34854600-34858200	Active TSS	iPS-18 Cell Line	embryonic stem cell
12	chr6:34854600-34858200	Active TSS	Psoas Muscle	Psoas
13	chr6:34854600-34858200	Active TSS	HSMM	muscle
14	chr6:34854600-34858400	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr6:34854600-34858600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr6:34854600-34858600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr6:34854600-34858800	Active TSS	H9 Cell Line	embryonic stem cell
18	chr6:34854600-34858800	Active TSS	HUES6 Cell Line	embryonic stem cell
19	chr6:34854600-34858800	Active TSS	Right Ventricle	heart
20	chr6:34854600-34859000	Active TSS	ES-I3 Cell Line	embryonic stem cell
21	chr6:34854800-34855800	Active TSS	Right Atrium	heart
22	chr6:34854800-34856200	Active TSS	HMEC	breast
23	chr6:34854800-34856200	Active TSS	HSMMtube	muscle
24	chr6:34854800-34856200	Active TSS	HUVEC	blood vessel
25	chr6:34854800-34856400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr6:34854800-34856400	Active TSS	Muscle Satellite Cultured Cells	--
27	chr6:34854800-34856400	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr6:34854800-34856400	Active TSS	Osteobl	bone
29	chr6:34854800-34857000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr6:34854800-34857000	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr6:34854800-34858000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
32	chr6:34854800-34858000	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
33	chr6:34854800-34858000	Active TSS	Brain Cingulate Gyrus	brain
34	chr6:34854800-34858200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
35	chr6:34854800-34858200	Active TSS	iPS-20b Cell Line	embryonic stem cell
36	chr6:34854800-34858200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr6:34854800-34858200	Active TSS	Esophagus	oesophagus
38	chr6:34854800-34858200	Active TSS	Fetal Kidney	kidney
39	chr6:34854800-34858200	Active TSS	GM12878-XiMat	blood
40	chr6:34854800-34858200	Active TSS	NH-A	brain
41	chr6:34854800-34858400	Active TSS	HUES64 Cell Line	embryonic stem cell
42	chr6:34854800-34858400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
43	chr6:34854800-34858400	Active TSS	Gastric	stomach
44	chr6:34854800-34858400	Active TSS	A549	lung
45	chr6:34854800-34858400	Active TSS	NHDF-Ad	bronchial
46	chr6:34854800-34858400	Active TSS	NHLF	lung
47	chr6:34854800-34858600	Active TSS	Pancreatic Islets	Pancreatic Islet
48	chr6:34854800-34858800	Active TSS	Breast Myoepithelial Primary Cells	Breast
49	chr6:34855000-34856400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr6:34855000-34856800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood

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