Variant report

Variant	rs9324803
Chromosome Location	chr5:154459486-154459487
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10223164	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11167708	0.94[ASN][1000 genomes]
rs12153378	0.94[ASN][1000 genomes]
rs12153386	0.94[ASN][1000 genomes]
rs12187210	0.97[ASN][1000 genomes]
rs12188773	0.97[ASN][1000 genomes]
rs12519670	0.94[ASN][1000 genomes]
rs34021636	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34121599	0.94[ASN][1000 genomes]
rs35235180	0.94[ASN][1000 genomes]
rs4958776	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4958780	0.94[ASN][1000 genomes]
rs6868742	0.94[ASN][1000 genomes]
rs6868904	0.94[ASN][1000 genomes]
rs6890088	0.94[ASN][1000 genomes]
rs6890098	0.94[ASN][1000 genomes]
rs6898774	0.94[ASN][1000 genomes]
rs7720827	0.88[ASN][1000 genomes]
rs9324802	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023588	chr5:154415586-154464455	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
2	nsv883059	chr5:154457905-154556230	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:154457000-154459800	Weak transcription	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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