Variant report

Variant	rs9344715
Chromosome Location	chr6:88448510-88448511
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs4707394	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4707403	0.83[AMR][1000 genomes]
rs7754587	0.83[AMR][1000 genomes]
rs9342120	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9362439	0.93[AMR][1000 genomes]
rs9362441	0.82[AMR][1000 genomes]
rs9444543	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9450795	0.83[AMR][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:88442600-88451600	Weak transcription	Primary B cells from cord blood	blood
2	chr6:88446600-88449000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
3	chr6:88446800-88449000	Enhancers	Primary T helper cells fromperipheralblood	blood
4	chr6:88446800-88449000	Enhancers	Fetal Intestine Large	intestine
5	chr6:88447000-88449400	Enhancers	Primary T cells fromperipheralblood	blood
6	chr6:88447200-88449400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
7	chr6:88447400-88449200	Enhancers	GM12878-XiMat	blood
8	chr6:88448000-88448600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
9	chr6:88448000-88451600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
10	chr6:88448000-88451800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
11	chr6:88448200-88451000	Weak transcription	K562	blood
12	chr6:88448200-88452000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
13	chr6:88448200-88455000	Weak transcription	HepG2	liver
14	chr6:88448400-88451400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
15	chr6:88448400-88451600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
16	chr6:88448400-88452000	Weak transcription	Primary T helper cells PMA-I stimulated	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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