Variant report

Variant	rs9342120
Chromosome Location	chr6:88455481-88455482
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs2153020	0.81[CHB][hapmap];0.80[LWK][hapmap];0.85[MKK][hapmap]
rs4707394	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4707403	0.84[ASW][hapmap];0.82[CEU][hapmap];0.85[CHB][hapmap];1.00[LWK][hapmap];0.97[MKK][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7754587	0.95[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs9344715	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9362439	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs9362441	0.88[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs9444543	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9450795	0.83[AMR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:88452800-88457000	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr6:88452800-88457000	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr6:88453200-88457200	Weak transcription	Primary B cells from cord blood	blood
4	chr6:88453600-88457000	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr6:88453600-88457200	Weak transcription	Primary B cells from peripheral blood	blood
6	chr6:88453800-88457400	Weak transcription	GM12878-XiMat	blood
7	chr6:88455000-88458200	Enhancers	HepG2	liver
8	chr6:88455200-88456600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr6:88455400-88456400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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