Variant report

Variant	rs9362439
Chromosome Location	chr6:88458324-88458325
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs13205684	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2153019	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2153020	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2325077	0.85[ASN][1000 genomes]
rs4707394	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs4707403	0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7738899	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7754587	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9294388	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs9342120	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs9344715	0.93[AMR][1000 genomes]
rs9362441	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9444542	0.87[ASN][1000 genomes]
rs9444543	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs9450795	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:88456400-88465400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr6:88457000-88458400	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr6:88457000-88458600	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr6:88457800-88482400	Weak transcription	Placenta	Placenta
5	chr6:88458000-88458600	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr6:88458200-88465600	Weak transcription	HepG2	liver

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links