Variant report
Variant | rs9349735 |
---|---|
Chromosome Location | chr6:54694630-54694631 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:3 , 50 per page) page:
1
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000168143 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs1503137 | 1.00[CHB][hapmap] |
rs1503150 | 1.00[CHB][hapmap] |
rs16886072 | 1.00[CHB][hapmap] |
rs16886073 | 1.00[CHB][hapmap] |
rs16886088 | 1.00[CHB][hapmap] |
rs16886105 | 1.00[CHB][hapmap] |
rs1910352 | 1.00[CHB][hapmap] |
rs239787 | 1.00[CHB][hapmap] |
rs239788 | 1.00[CHB][hapmap] |
rs239789 | 1.00[CHB][hapmap] |
rs239791 | 1.00[CHB][hapmap] |
rs239793 | 1.00[CHB][hapmap] |
rs239798 | 1.00[CHB][hapmap] |
rs239802 | 1.00[CHB][hapmap] |
rs239805 | 1.00[CHB][hapmap] |
rs239823 | 1.00[CHB][hapmap] |
rs239824 | 1.00[CHB][hapmap] |
rs239828 | 1.00[CHB][hapmap] |
rs239829 | 1.00[CHB][hapmap] |
rs239830 | 1.00[CHB][hapmap] |
rs239831 | 1.00[CHB][hapmap] |
rs239832 | 1.00[CHB][hapmap] |
rs239833 | 1.00[CHB][hapmap] |
rs239834 | 1.00[CHB][hapmap] |
rs239836 | 1.00[CHB][hapmap] |
rs239838 | 1.00[CHB][hapmap] |
rs239839 | 1.00[CHB][hapmap] |
rs239840 | 1.00[CHB][hapmap] |
rs239841 | 1.00[CHB][hapmap] |
rs239843 | 1.00[CHB][hapmap] |
rs239846 | 1.00[CHB][hapmap] |
rs239847 | 1.00[CHB][hapmap] |
rs239848 | 1.00[CHB][hapmap] |
rs239852 | 1.00[CHB][hapmap] |
rs239853 | 1.00[CHB][hapmap] |
rs2746440 | 1.00[CHB][hapmap] |
rs398483 | 1.00[CHB][hapmap] |
rs406149 | 1.00[CHB][hapmap] |
rs41431945 | 1.00[CHB][hapmap] |
rs7453441 | 1.00[CHB][hapmap] |
rs7739951 | 1.00[CHB][hapmap] |
rs7743188 | 1.00[CHB][hapmap] |
rs7773204 | 1.00[CHB][hapmap] |
rs9367588 | 1.00[CHB][hapmap] |
rs9367589 | 1.00[CHB][hapmap] |
rs9367596 | 1.00[CHB][hapmap] |
rs9370335 | 1.00[CHB][hapmap] |
rs9382377 | 1.00[CHB][hapmap] |
rs9382388 | 1.00[CHB][hapmap] |
rs9395992 | 1.00[CHB][hapmap] |
rs9475077 | 1.00[CHB][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv885900 | chr6:54517968-54852462 | Active TSS Bivalent Enhancer Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 13 gene(s) | inside rSNPs | diseases |
2 | esv2763553 | chr6:54687979-54820487 | Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
No data |