Variant report

No.	Distal block	Cell Line	Cell type
1	chr6:16029934..16037456-chr6:16127921..16130807,9	K562	blood:
2	chr6:16026358..16029621-chr6:16030628..16033176,4	K562	blood:
3	chr6:16031540..16033929-chr6:16034030..16038296,6	K562	blood:
4	chr6:16031294..16033110-chr6:16127480..16129876,2	K562	blood:

Variant related genes	Relation type
ENSG00000007944	Chromatin interaction

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10949337	1.00[AFR][1000 genomes]
rs12663816	1.00[AFR][1000 genomes]
rs57441444	1.00[ASN][1000 genomes]
rs57455393	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs58013991	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9349992	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9349993	1.00[ASN][1000 genomes]
rs9349994	1.00[AFR][1000 genomes]
rs9358077	1.00[AFR][1000 genomes]
rs9358078	1.00[AFR][1000 genomes]
rs9358079	1.00[AFR][1000 genomes]
rs9367889	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9370857	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9370858	1.00[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs9370859	1.00[AFR][1000 genomes]
rs9370860	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9370861	1.00[AFR][1000 genomes]
rs9383100	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9383101	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs9383102	0.89[ASN][1000 genomes]
rs9383104	1.00[AFR][1000 genomes]
rs9383105	1.00[AFR][1000 genomes]
rs9383106	1.00[AFR][1000 genomes]
rs9383107	1.00[AFR][1000 genomes]
rs9383108	1.00[AFR][1000 genomes]
rs9396634	1.00[AFR][1000 genomes]
rs9396635	1.00[AFR][1000 genomes]
rs9396637	1.00[AFR][1000 genomes]
rs9396638	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv462642	chr6:16019115-16056026	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv601007	chr6:16019115-16056026	Enhancers Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:16031800-16033000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr6:16032000-16032800	ZNF genes & repeats	GM12878-XiMat	blood
3	chr6:16032400-16032600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr6:16032400-16032600	Flanking Active TSS	K562	blood

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