Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:145195775..145198771-chr6:145199592..145202837,3	K562	blood:

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs11969748	0.89[EUR][1000 genomes]
rs12174209	0.92[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13210332	0.86[EUR][1000 genomes]
rs4323328	0.89[EUR][1000 genomes]
rs4487599	0.90[EUR][1000 genomes]
rs57337295	0.88[EUR][1000 genomes]
rs6570656	0.95[EUR][1000 genomes]
rs6913165	0.89[EUR][1000 genomes]
rs71547172	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7769065	0.90[EUR][1000 genomes]
rs9285505	0.90[EUR][1000 genomes]
rs9322003	0.90[EUR][1000 genomes]
rs9322004	0.90[EUR][1000 genomes]
rs9322005	0.89[EUR][1000 genomes]
rs9373433	0.89[EUR][1000 genomes]
rs9373434	0.89[EUR][1000 genomes]
rs9376869	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9376874	0.89[EUR][1000 genomes]
rs9386089	0.89[EUR][1000 genomes]
rs9390251	0.89[EUR][1000 genomes]
rs9390252	0.89[EUR][1000 genomes]
rs9390253	0.89[EUR][1000 genomes]
rs9390254	0.86[EUR][1000 genomes]
rs9390257	0.89[EUR][1000 genomes]
rs9399514	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9399519	0.90[EUR][1000 genomes]
rs9399520	0.89[EUR][1000 genomes]
rs9403621	0.97[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9403627	0.90[EUR][1000 genomes]
rs9403628	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9403629	0.89[EUR][1000 genomes]
rs9403631	0.90[EUR][1000 genomes]
rs9403633	0.89[EUR][1000 genomes]
rs9403634	0.90[EUR][1000 genomes]
rs9497120	0.90[EUR][1000 genomes]
rs9497121	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016747	chr6:144917411-145599874	Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv830833	chr6:145001310-145201143	Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
3	nsv886740	chr6:145105354-145199259	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
4	nsv464070	chr6:145184504-145214952	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv604823	chr6:145184504-145214952	Weak transcription ZNF genes & repeats Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv432966	chr6:145191307-145201307	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:145194200-145196200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr6:145194200-145198400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr6:145194400-145196200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr6:145195400-145196200	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr6:145195800-145196200	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr6:145195800-145196200	Enhancers	iPS-18 Cell Line	embryonic stem cell

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