Variant report

No.	Distal block	Cell Line	Cell type
1	chr6:121399181..121401952-chr6:121402264..121404345,2	K562	blood:
2	chr6:121395589..121397315-chr6:121403904..121405742,2	K562	blood:
3	chr6:121400057..121403003-chr6:121403745..121405643,2	K562	blood:

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs11153997	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12664050	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1891646	0.94[JPT][hapmap]
rs1995313	0.82[JPT][hapmap]
rs218867	1.00[JPT][hapmap]
rs2202065	0.83[CEU][hapmap];0.80[JPT][hapmap]
rs28426974	0.83[EUR][1000 genomes]
rs407586	1.00[JPT][hapmap]
rs4412234	0.90[JPT][hapmap]
rs443149	1.00[JPT][hapmap]
rs4498397	0.88[JPT][hapmap]
rs58778079	0.85[EUR][1000 genomes]
rs6926502	0.94[JPT][hapmap]
rs6941235	0.94[JPT][hapmap]
rs7450632	0.89[JPT][hapmap]
rs7768058	0.90[JPT][hapmap]
rs9320801	1.00[JPT][hapmap]
rs9372635	0.85[EUR][1000 genomes]
rs9374999	0.83[EUR][1000 genomes]
rs9375001	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9375002	1.00[CEU][hapmap];0.81[JPT][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9387915	0.84[EUR][1000 genomes]
rs9387917	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9387920	0.94[JPT][hapmap]
rs9387924	0.84[CHB][hapmap];0.94[JPT][hapmap]
rs9387929	0.90[JPT][hapmap]
rs9398617	0.83[AFR][1000 genomes]
rs9398622	0.84[CHB][hapmap];0.94[JPT][hapmap]
rs9401370	1.00[CEU][hapmap];0.85[JPT][hapmap];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9401384	0.84[JPT][hapmap]
rs9482118	0.95[JPT][hapmap]
rs9482119	0.90[JPT][hapmap]
rs976611	0.84[CHB][hapmap];0.94[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023384	chr6:121235867-121683448	Enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
2	nsv886592	chr6:121260089-121425387	Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv530527	chr6:121298528-121789855	ZNF genes & repeats Enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
4	nsv886593	chr6:121362591-121414770	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv1830193	chr6:121392847-121425387	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
6	esv1812259	chr6:121404112-121451095	ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:121390800-121444000	Weak transcription	Ovary	ovary
2	chr6:121403600-121443400	Weak transcription	Left Ventricle	heart

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