Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10888203	0.85[EUR][1000 genomes]
rs1869168	0.80[EUR][1000 genomes]
rs1869169	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3850927	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3850928	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3850929	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3911249	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7093427	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7096999	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7097286	0.80[EUR][1000 genomes]
rs786771	0.80[EUR][1000 genomes]
rs786775	0.80[EUR][1000 genomes]
rs786795	0.80[EUR][1000 genomes]
rs7913865	0.83[EUR][1000 genomes]
rs796814	0.80[EUR][1000 genomes]
rs812005	0.80[EUR][1000 genomes]
rs896571	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9421763	0.91[EUR][1000 genomes]
rs9422322	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9422335	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9422352	0.80[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs9422347	SYT15	cis	parietal	SCAN

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:48575600-48598200	Weak transcription	NH-A	brain
2	chr10:48582400-48583800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr10:48583200-48584200	ZNF genes & repeats	Fetal Lung	lung

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