Variant report

Variant	rs7093427
Chromosome Location	chr10:48575379-48575380
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:48574920..48577214-chr10:48596773..48599642,2	K562	blood:
2	chr10:48573259..48576256-chr10:48576994..48579438,2	K562	blood:
3	chr10:48573686..48575783-chr10:48577715..48579517,2	MCF-7	breast:
4	chr10:48574683..48577036-chr10:48584937..48587666,2	K562	blood:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10888203	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1869168	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1869169	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs3850927	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3850928	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3850929	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3911249	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7096999	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7097286	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72790355	1.00[ASN][1000 genomes]
rs72790372	0.93[ASN][1000 genomes]
rs72792204	0.86[ASN][1000 genomes]
rs786771	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs786772	0.86[ASN][1000 genomes]
rs786775	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs786794	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs786795	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7913865	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs796814	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs812005	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs812545	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs896571	0.81[AFR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9421763	0.96[ASN][1000 genomes]
rs9422322	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9422335	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9422347	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9422352	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:48573600-48575400	Enhancers	NHEK	skin
2	chr10:48574000-48578200	Weak transcription	Spleen	Spleen
3	chr10:48574200-48576000	Weak transcription	Thymus	Thymus
4	chr10:48574200-48577800	Weak transcription	Colon Smooth Muscle	Colon
5	chr10:48574400-48578000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr10:48574400-48578600	Weak transcription	Fetal Muscle Leg	muscle
7	chr10:48574600-48577400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr10:48574800-48575600	Enhancers	NH-A	brain
9	chr10:48574800-48578400	Weak transcription	Fetal Stomach	stomach
10	chr10:48574800-48578600	Weak transcription	Lung	lung
11	chr10:48575000-48577000	Weak transcription	Monocytes-CD14+_RO01746	blood
12	chr10:48575000-48577600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr10:48575000-48577600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr10:48575000-48577600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr10:48575000-48577800	Weak transcription	NHLF	lung
16	chr10:48575000-48578000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr10:48575000-48578000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr10:48575000-48579000	Weak transcription	Fetal Lung	lung
19	chr10:48575200-48577200	Weak transcription	Primary monocytes fromperipheralblood	blood

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