Variant report

Variant	rs9443061
Chromosome Location	chr6:75466256-75466257
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs12332816	1.00[AMR][1000 genomes]
rs12333047	1.00[AMR][1000 genomes]
rs12333198	1.00[AMR][1000 genomes]
rs13437111	1.00[AMR][1000 genomes]
rs61177673	1.00[AMR][1000 genomes]
rs9293988	1.00[AMR][1000 genomes]
rs9443062	1.00[AMR][1000 genomes]
rs9443084	1.00[AMR][1000 genomes]
rs9443089	1.00[AMR][1000 genomes]
rs9443099	1.00[AMR][1000 genomes]
rs9443101	1.00[AMR][1000 genomes]
rs9443106	1.00[AMR][1000 genomes]
rs9447275	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9447277	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9447328	1.00[AMR][1000 genomes]
rs9447329	1.00[AMR][1000 genomes]
rs9447333	1.00[AMR][1000 genomes]
rs9447338	1.00[AMR][1000 genomes]
rs9447369	1.00[AMR][1000 genomes]
rs9447372	1.00[AMR][1000 genomes]
rs9447373	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv520746	chr6:75211546-75691814	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv917283	chr6:75234428-75641440	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv830695	chr6:75409656-75583115	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv886169	chr6:75432861-75610722	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:75460800-75467600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr6:75463400-75466600	Weak transcription	Ovary	ovary
3	chr6:75465000-75467000	Enhancers	Fetal Brain Male	brain
4	chr6:75465400-75466400	Weak transcription	Pancreas	Pancrea
5	chr6:75465400-75467200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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