Variant report

No.	Distal block	Cell Line	Cell type
1	chr6:73865237..73867807-chr6:73877060..73879197,2	K562	blood:
2	6:73859137-73881637..6:73927031-73938730	Hela-S3	cervix:
3	6:73859137-73881637..6:74062967-74076046	GM12878	blood:
4	6:73859137-73881637..6:74099986-74112890	GM12878	blood:

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs1574007	1.00[CEU][hapmap]
rs16883160	1.00[CEU][hapmap]
rs2027543	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs520570	1.00[CEU][hapmap]
rs6920341	1.00[CEU][hapmap]
rs6928332	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6938067	1.00[CEU][hapmap]
rs6939559	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6940584	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7744354	1.00[CEU][hapmap]
rs7764373	1.00[CEU][hapmap]
rs7771553	1.00[CEU][hapmap]
rs7771888	1.00[CEU][hapmap]
rs9442873	1.00[CEU][hapmap]
rs9442875	1.00[CEU][hapmap]
rs9442876	1.00[CEU][hapmap]
rs9446794	1.00[CEU][hapmap]
rs9446799	1.00[CEU][hapmap]
rs9446800	1.00[CEU][hapmap]
rs9446801	1.00[CEU][hapmap]
rs9446814	1.00[CEU][hapmap]
rs9446816	1.00[CEU][hapmap]
rs9446818	1.00[CEU][hapmap]
rs9446819	1.00[CEU][hapmap]
rs9446820	1.00[CEU][hapmap]
rs9446821	1.00[CEU][hapmap]
rs9446822	1.00[CEU][hapmap]
rs9446823	1.00[CEU][hapmap]
rs9446853	1.00[CEU][hapmap]
rs966427	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3410973	chr6:73716033-74419545	Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	191 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:73844400-73867000	Weak transcription	Primary hematopoietic stem cells	blood
2	chr6:73846400-73879200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr6:73854600-73867200	Weak transcription	Aorta	Aorta
4	chr6:73856600-73876600	Weak transcription	Primary B cells from cord blood	blood
5	chr6:73863200-73876400	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr6:73863600-73878000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr6:73865000-73867200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr6:73865200-73867000	Strong transcription	Primary T cells from cord blood	blood
9	chr6:73866000-73866600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr6:73866400-73867000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr6:73866400-73867600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr6:73866400-73867800	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood

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