Variant report

Variant	rs9449344
Chromosome Location	chr6:82244599-82244600
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10943824	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1341225	0.82[AMR][1000 genomes]
rs2025273	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2753422	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4285367	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4448140	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4706897	0.85[AMR][1000 genomes]
rs9294233	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9344207	0.82[AMR][1000 genomes]
rs9353012	0.89[EUR][1000 genomes]
rs9361848	0.82[AMR][1000 genomes]
rs9449350	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9449357	0.81[AMR][1000 genomes]
rs975605	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv604087	chr6:81792413-82326091	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82242600-82245000	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr6:82244000-82259000	Weak transcription	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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