Variant report

Variant	rs9455369
Chromosome Location	chr6:71880717-71880718
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10080657	1.00[AMR][1000 genomes]
rs59056640	1.00[AMR][1000 genomes]
rs60980578	1.00[AMR][1000 genomes]
rs6937214	1.00[AMR][1000 genomes]
rs73747110	1.00[AMR][1000 genomes]
rs73747111	1.00[AMR][1000 genomes]
rs73749828	1.00[AMR][1000 genomes]
rs9446348	1.00[AMR][1000 genomes]
rs9446372	1.00[AMR][1000 genomes]
rs9446375	1.00[AMR][1000 genomes]
rs9446377	1.00[AMR][1000 genomes]
rs9455376	1.00[AMR][1000 genomes]
rs9455377	1.00[AMR][1000 genomes]
rs9455430	1.00[AMR][1000 genomes]
rs9455434	1.00[AMR][1000 genomes]
rs9455435	1.00[AMR][1000 genomes]
rs9455436	1.00[AMR][1000 genomes]
rs9455437	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527265	chr6:71867477-71902656	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv886149	chr6:71875777-71936292	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71880400-71881400	Enhancers	Fetal Intestine Small	intestine
2	chr6:71880600-71881800	Enhancers	Fetal Intestine Large	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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