Variant report

Variant	rs9455422
Chromosome Location	chr6:71987942-71987943
allele	A/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:71987014..71989345-chr6:71998365..72000041,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000119900	Chromatin interaction

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs13212120	1.00[ASN][1000 genomes]
rs13212398	1.00[ASN][1000 genomes]
rs1527718	1.00[ASN][1000 genomes]
rs16881125	1.00[ASN][1000 genomes]
rs16881130	1.00[ASN][1000 genomes]
rs20512	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs33997649	1.00[ASN][1000 genomes]
rs35154262	1.00[ASN][1000 genomes]
rs41265361	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41265363	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55722044	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61131500	1.00[ASN][1000 genomes]
rs71555480	1.00[ASN][1000 genomes]
rs7739908	1.00[ASN][1000 genomes]
rs7747357	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9294890	0.83[EUR][1000 genomes]
rs9294894	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9294896	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9294897	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9294898	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9294900	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9446362	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9446363	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9446365	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9446370	1.00[YRI][hapmap];0.94[EUR][1000 genomes]
rs9455402	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455404	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455405	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455406	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455408	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455411	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455412	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455413	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455415	1.00[ASN][1000 genomes]
rs9455416	1.00[ASN][1000 genomes]
rs9455423	1.00[YRI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455424	1.00[YRI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455425	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455426	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455427	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71979400-71988200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr6:71987400-71988200	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr6:71987800-71988200	Enhancers	H1 Cell Line	embryonic stem cell
4	chr6:71987800-71988200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr6:71987800-71988200	Enhancers	Left Ventricle	heart

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