The 2.0 version of rSNPBase

Variant report

Variant rs71555480
Chromosome Location chr6:72039194-72039195
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:72004200-72041600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr6:72004400-72043000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr6:72018000-72043200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr6:72018000-72043200 Weak transcription HSMM muscle
5 chr6:72020200-72043600 Weak transcription HSMMtube muscle
6 chr6:72031600-72040400 Weak transcription Lung lung
7 chr6:72031600-72056600 Weak transcription Placenta Placenta
8 chr6:72031600-72060200 Weak transcription Stomach Smooth Muscle stomach
9 chr6:72031600-72077400 Weak transcription Pancreas Pancrea
10 chr6:72033800-72046000 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr6:72034200-72053400 Weak transcription Psoas Muscle Psoas
12 chr6:72034200-72058600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr6:72034400-72052000 Weak transcription Adipose Nuclei Adipose
14 chr6:72034800-72060400 Weak transcription Left Ventricle heart
15 chr6:72036600-72043400 Weak transcription A549 lung
16 chr6:72036600-72055800 Weak transcription Fetal Lung lung
17 chr6:72036800-72043200 Weak transcription Muscle Satellite Cultured Cells --
18 chr6:72037400-72042600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr6:72037600-72040600 Weak transcription Fetal Muscle Leg muscle
20 chr6:72037600-72042400 Weak transcription NHDF-Ad bronchial
21 chr6:72037600-72042800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr6:72038800-72039200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
23 chr6:72038800-72039400 Genic enhancers Breast Myoepithelial Primary Cells Breast
24 chr6:72038800-72039400 Strong transcription Aorta Aorta
25 chr6:72038800-72039400 Strong transcription Fetal Kidney kidney
26 chr6:72039000-72039200 Enhancers Brain Anterior Caudate brain

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Last update: Aug 31, 2015