Variant report

Variant	rs9446363
Chromosome Location	chr6:71977806-71977807
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs13212120	1.00[ASN][1000 genomes]
rs13212398	1.00[ASN][1000 genomes]
rs1527718	1.00[ASN][1000 genomes]
rs16881125	1.00[ASN][1000 genomes]
rs16881130	1.00[ASN][1000 genomes]
rs20512	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs33997649	1.00[ASN][1000 genomes]
rs35154262	1.00[ASN][1000 genomes]
rs41265361	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41265363	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55722044	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61131500	1.00[ASN][1000 genomes]
rs71555480	1.00[ASN][1000 genomes]
rs7739908	1.00[ASN][1000 genomes]
rs7747357	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9294890	0.83[EUR][1000 genomes]
rs9294893	0.90[AFR][1000 genomes]
rs9294894	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9294895	0.90[AFR][1000 genomes]
rs9294896	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9294897	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9294898	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9294900	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9446362	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9446365	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9446370	0.90[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs9455402	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455404	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455405	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455406	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455408	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455411	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455412	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455413	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455415	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9455416	1.00[ASN][1000 genomes]
rs9455421	0.90[AFR][1000 genomes]
rs9455422	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455423	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455424	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455425	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455426	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9455427	0.90[AFR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71968000-71980400	Weak transcription	Aorta	Aorta
2	chr6:71976400-71980000	Weak transcription	Spleen	Spleen
3	chr6:71976400-71980400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr6:71977400-71978400	Enhancers	GM12878-XiMat	blood

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