Variant report

Variant	rs9463007
Chromosome Location	chr6:44639723-44639724
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:44636396..44638850-chr6:44639424..44641706,2	K562	blood:
2	chr6:44635305..44638850-chr6:44639424..44643033,3	K562	blood:
3	chr6:44639630..44642555-chr6:44702558..44704571,3	MCF-7	breast:
4	chr6:44624133..44626306-chr6:44639177..44640852,2	MCF-7	breast:
5	chr6:44628498..44636418-chr6:44638711..44643963,7	MCF-7	breast:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs4711796	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs55643629	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs67850674	0.82[EUR][1000 genomes]
rs6901297	0.82[EUR][1000 genomes]
rs9296445	0.83[EUR][1000 genomes]
rs9463008	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9463009	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9472321	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9472322	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9472323	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9472324	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9472325	0.82[EUR][1000 genomes]

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44635000-44640200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr6:44635600-44640000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr6:44636000-44642200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr6:44636400-44642000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr6:44636400-44647400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr6:44636400-44649200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr6:44636600-44647400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr6:44637400-44639800	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr6:44637400-44644000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr6:44637400-44647400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr6:44637800-44641000	Enhancers	HSMMtube	muscle
12	chr6:44638400-44644800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr6:44638600-44641000	Enhancers	Muscle Satellite Cultured Cells	--
14	chr6:44638600-44641200	Enhancers	iPS-15b Cell Line	embryonic stem cell
15	chr6:44638600-44641200	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr6:44638600-44641800	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr6:44638600-44642000	Enhancers	HSMM	muscle
18	chr6:44638600-44645000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr6:44638800-44640000	Weak transcription	HMEC	breast
20	chr6:44638800-44641200	Enhancers	HUES64 Cell Line	embryonic stem cell
21	chr6:44639000-44639800	Weak transcription	H1 Cell Line	embryonic stem cell
22	chr6:44639000-44640000	Weak transcription	H9 Cell Line	embryonic stem cell
23	chr6:44639000-44640200	Weak transcription	NHEK	skin
24	chr6:44639000-44641000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr6:44639200-44642800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr6:44639200-44647600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
27	chr6:44639400-44639800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
28	chr6:44639400-44639800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
29	chr6:44639400-44640400	Weak transcription	Placenta Amnion	Placenta Amnion
30	chr6:44639400-44647400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr6:44639600-44640800	Enhancers	HUES48 Cell Line	embryonic stem cell

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