Variant report

Variant	rs9464846
Chromosome Location	chr6:15968885-15968886
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10214915	0.80[CEU][hapmap];0.84[EUR][1000 genomes]
rs10949321	0.96[CEU][hapmap];0.83[EUR][1000 genomes]
rs10949325	0.80[CEU][hapmap]
rs10949329	0.88[CEU][hapmap];0.82[EUR][1000 genomes]
rs1122664	0.80[CEU][hapmap];0.84[EUR][1000 genomes]
rs12204956	0.96[CEU][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12209943	0.80[CEU][hapmap]
rs1539422	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs1935788	0.81[CEU][hapmap]
rs2327929	0.93[ASN][1000 genomes]
rs2327930	0.80[CEU][hapmap]
rs6935987	0.80[CEU][hapmap]
rs71559648	0.88[EUR][1000 genomes]
rs7349936	0.81[CEU][hapmap]
rs7357026	0.80[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs7742894	0.86[CEU][hapmap]
rs9358075	0.85[CEU][hapmap];0.95[CHB][hapmap];0.89[JPT][hapmap];0.93[ASN][1000 genomes]
rs9637977	0.81[CEU][hapmap];0.95[CHB][hapmap];0.86[JPT][hapmap];0.94[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15963200-15969000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr6:15963200-15969000	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr6:15963600-15969000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr6:15966000-15971200	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr6:15968400-15970800	Enhancers	Placenta	Placenta
6	chr6:15968400-15971000	Enhancers	HMEC	breast
7	chr6:15968600-15970600	Enhancers	NHEK	skin
8	chr6:15968600-15971000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr6:15968600-15971000	Enhancers	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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