Variant report

Variant rs9480965
Chromosome Location chr6:109799484-109799485
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:109780600-109800400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr6:109781400-109802200 Strong transcription HSMM muscle
3 chr6:109782400-109799800 Strong transcription Primary hematopoietic stem cells short term culture blood
4 chr6:109782400-109799800 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr6:109782400-109800000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr6:109782400-109803000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr6:109782600-109799600 Strong transcription Fetal Muscle Trunk muscle
8 chr6:109782600-109800000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr6:109783200-109799800 Strong transcription Cortex derived primary cultured neurospheres brain
10 chr6:109786200-109800200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr6:109786400-109799600 Strong transcription Fetal Muscle Leg muscle
12 chr6:109786800-109799800 Strong transcription Fetal Adrenal Gland Adrenal Gland
13 chr6:109787800-109800600 Weak transcription Fetal Heart heart
14 chr6:109789400-109803200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr6:109794400-109801200 Weak transcription HSMMtube muscle
16 chr6:109795000-109800000 Weak transcription NH-A brain
17 chr6:109795200-109802400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr6:109796800-109800000 Weak transcription NHLF lung
19 chr6:109797000-109799800 Genic enhancers Primary B cells from peripheral blood blood
20 chr6:109797400-109799600 Weak transcription Brain Inferior Temporal Lobe brain
21 chr6:109797800-109799600 Genic enhancers Primary B cells from cord blood blood
22 chr6:109797800-109799800 Genic enhancers Primary T cells fromperipheralblood blood
23 chr6:109797800-109799800 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
24 chr6:109797800-109800000 Genic enhancers Brain Angular Gyrus brain
25 chr6:109797800-109800200 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr6:109797800-109803400 Transcr. at gene 5' and 3' Dnd41 blood
27 chr6:109798000-109799800 Genic enhancers Thymus Thymus
28 chr6:109798000-109799800 Weak transcription HUVEC blood vessel
29 chr6:109798000-109800000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr6:109798000-109800200 Enhancers Primary T helper naive cells from peripheral blood blood
31 chr6:109798000-109800200 Weak transcription A549 lung
32 chr6:109798000-109803400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr6:109798000-109803400 Genic enhancers Fetal Thymus thymus
34 chr6:109798200-109799800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr6:109798200-109799800 Weak transcription Ovary ovary
36 chr6:109798200-109800200 Weak transcription Osteobl bone
37 chr6:109798200-109802200 Weak transcription Gastric stomach
38 chr6:109798200-109803000 Weak transcription Placenta Amnion Placenta Amnion
39 chr6:109798400-109800200 Weak transcription HMEC breast
40 chr6:109798600-109799600 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
41 chr6:109798600-109799600 Strong transcription Liver Liver
42 chr6:109798600-109799800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr6:109798600-109799800 Genic enhancers Colon Smooth Muscle Colon
44 chr6:109798600-109800000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr6:109798600-109802600 Enhancers Primary neutrophils fromperipheralblood blood
46 chr6:109798600-109802800 Transcr. at gene 5' and 3' Primary T cells from cord blood blood
47 chr6:109798600-109803400 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
48 chr6:109798800-109799600 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
49 chr6:109798800-109799600 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
50 chr6:109798800-109799600 Genic enhancers Psoas Muscle Psoas

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