Variant report
Variant | rs9523776 |
---|---|
Chromosome Location | chr13:93345919-93345920 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs17233850 | 0.95[CEU][hapmap] |
rs41300596 | 0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs7317017 | 1.00[CEU][hapmap];1.00[TSI][hapmap] |
rs7322501 | 1.00[CEU][hapmap];0.91[EUR][1000 genomes] |
rs9301833 | 0.90[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.97[TSI][hapmap] |
rs9516115 | 0.86[CHB][hapmap];0.82[JPT][hapmap];0.86[ASN][1000 genomes] |
rs9516119 | 0.80[CEU][hapmap];0.86[CHB][hapmap];0.94[CHD][hapmap];0.84[GIH][hapmap];0.82[JPT][hapmap];0.91[ASN][1000 genomes] |
rs9516129 | 0.95[CEU][hapmap];0.82[TSI][hapmap] |
rs9523741 | 1.00[JPT][hapmap] |
rs9523752 | 0.94[CHD][hapmap];0.82[JPT][hapmap] |
rs9523761 | 0.86[CHB][hapmap];0.82[JPT][hapmap];0.86[ASN][1000 genomes] |
rs9523787 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[TSI][hapmap] |
rs9523788 | 1.00[CEU][hapmap];1.00[JPT][hapmap] |
rs9523789 | 0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs9523790 | 0.95[CEU][hapmap] |
rs9523791 | 0.88[CEU][hapmap];0.82[TSI][hapmap] |
rs9523792 | 0.95[CEU][hapmap];0.82[TSI][hapmap] |
rs9523793 | 0.86[CEU][hapmap] |
rs9561132 | 0.95[CEU][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv456071 | chr13:93279563-93377562 | Enhancers Weak transcription Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
2 | nsv562745 | chr13:93279563-93377562 | Enhancers Weak transcription Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
3 | esv18734 | chr13:93279898-93352628 | Flanking Active TSS Weak transcription Enhancers Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
4 | nsv983702 | chr13:93291025-93353518 | Enhancers Weak transcription Active TSS Flanking Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |