Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10492504	0.85[AMR][1000 genomes]
rs1177726	0.80[CEU][hapmap]
rs1330995	0.80[CEU][hapmap]
rs1411751	1.00[CHB][hapmap];0.88[JPT][hapmap]
rs16947132	0.80[CEU][hapmap]
rs16947150	0.80[CEU][hapmap]
rs17426071	0.80[CEU][hapmap];0.85[AMR][1000 genomes]
rs1819439	0.80[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap]
rs2148521	0.80[CEU][hapmap];0.81[EUR][1000 genomes]
rs2182533	0.80[CEU][hapmap];0.81[EUR][1000 genomes]
rs2209651	0.85[AMR][1000 genomes]
rs4281579	0.85[AMR][1000 genomes]
rs4408406	0.80[CEU][hapmap]
rs57786284	0.81[EUR][1000 genomes]
rs59410447	0.81[AMR][1000 genomes]
rs6650316	0.80[CEU][hapmap]
rs72636830	0.85[AMR][1000 genomes]
rs72636832	0.85[AMR][1000 genomes]
rs72636834	0.85[AMR][1000 genomes]
rs72636840	0.83[AMR][1000 genomes]
rs7334533	0.80[CEU][hapmap]
rs7489550	0.81[AMR][1000 genomes]
rs9560983	0.81[EUR][1000 genomes]
rs9560984	0.80[CEU][hapmap];0.81[EUR][1000 genomes]
rs9560985	0.81[EUR][1000 genomes]
rs9560986	0.80[CEU][hapmap];0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2756005	chr13:92584199-93080799	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1035365	chr13:92805325-92926114	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv1053468	chr13:92814581-92893231	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv456067	chr13:92868073-92967664	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv562726	chr13:92868073-92967664	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv900902	chr13:92884370-92942274	Weak transcription Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be: