Variant report

Variant	rs9563051
Chromosome Location	chr13:51978300-51978301
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:51971225..51973020-chr13:51976171..51978919,2	MCF-7	breast:

rs_ID	r²[population]
rs2274061	0.83[AFR][1000 genomes]
rs2274929	0.83[AFR][1000 genomes]
rs3825524	0.86[AFR][1000 genomes]
rs7321642	0.84[AFR][1000 genomes]
rs7333661	0.88[AFR][1000 genomes]
rs7335141	0.82[AFR][1000 genomes]
rs9316537	0.88[AFR][1000 genomes]
rs9316539	0.90[AFR][1000 genomes]
rs9526754	0.83[AFR][1000 genomes]

Chromatin state (count:106 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:51945800-52016600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr13:51946200-51988000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr13:51949400-52025000	Weak transcription	Fetal Muscle Leg	muscle
4	chr13:51950000-52025200	Weak transcription	Fetal Muscle Trunk	muscle
5	chr13:51950200-51999800	Weak transcription	Brain Germinal Matrix	brain
6	chr13:51957800-51978400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
7	chr13:51957800-51986600	Weak transcription	Fetal Thymus	thymus
8	chr13:51958000-51996800	Weak transcription	Thymus	Thymus
9	chr13:51958200-51990000	Weak transcription	HMEC	breast
10	chr13:51958400-51987800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr13:51959200-51981200	Weak transcription	Primary B cells from peripheral blood	blood
12	chr13:51959800-51989400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr13:51962200-51979400	Weak transcription	HUVEC	blood vessel
14	chr13:51962200-51989600	Weak transcription	Primary T cells fromperipheralblood	blood
15	chr13:51962200-51993200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr13:51963200-52024800	Weak transcription	Fetal Intestine Large	intestine
17	chr13:51963600-51989800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr13:51963600-52003600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
19	chr13:51968200-51989800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr13:51969600-51995000	Weak transcription	Rectal Mucosa Donor 29	rectum
21	chr13:51971000-51979600	Weak transcription	Primary monocytes fromperipheralblood	blood
22	chr13:51971800-51986600	Weak transcription	H9 Cell Line	embryonic stem cell
23	chr13:51971800-51990000	Weak transcription	Rectal Mucosa Donor 31	rectum
24	chr13:51971800-52025000	Weak transcription	Fetal Stomach	stomach
25	chr13:51972000-51979200	Weak transcription	Brain Substantia Nigra	brain
26	chr13:51972000-51979600	Weak transcription	Brain Inferior Temporal Lobe	brain
27	chr13:51972000-51980400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
28	chr13:51972000-51980600	Weak transcription	Brain Anterior Caudate	brain
29	chr13:51972000-51984400	Weak transcription	NH-A	brain
30	chr13:51972000-51985000	Weak transcription	Fetal Intestine Small	intestine
31	chr13:51972000-51986600	Weak transcription	Fetal Brain Male	brain
32	chr13:51972000-51987800	Weak transcription	Adipose Nuclei	Adipose
33	chr13:51972000-51988000	Weak transcription	Primary neutrophils fromperipheralblood	blood
34	chr13:51972000-51989600	Weak transcription	H1 Cell Line	embryonic stem cell
35	chr13:51972000-51989800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
36	chr13:51972000-51990000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
37	chr13:51972000-51990000	Weak transcription	Duodenum Mucosa	Duodenum
38	chr13:51972000-51990000	Weak transcription	K562	blood
39	chr13:51972000-51990000	Weak transcription	NHEK	skin
40	chr13:51972000-51990000	Weak transcription	NHLF	lung
41	chr13:51972000-51993400	Weak transcription	Stomach Mucosa	stomach
42	chr13:51972000-51995000	Weak transcription	Placenta	Placenta
43	chr13:51972000-51995200	Weak transcription	HSMMtube	muscle
44	chr13:51972000-51996800	Weak transcription	Ovary	ovary
45	chr13:51972000-51999400	Weak transcription	Small Intestine	intestine
46	chr13:51972000-52005200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr13:51972000-52016000	Weak transcription	Pancreas	Pancrea
48	chr13:51972200-51980200	Weak transcription	Muscle Satellite Cultured Cells	--
49	chr13:51972200-51981200	Weak transcription	Brain Angular Gyrus	brain
50	chr13:51972200-51981400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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