Variant report

Variant	rs9589578
Chromosome Location	chr13:93219179-93219180
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs16947779	1.00[CEU][hapmap];0.91[YRI][hapmap]
rs28723564	1.00[EUR][1000 genomes]
rs7330553	1.00[CEU][hapmap]
rs7983573	1.00[CEU][hapmap]
rs8000850	1.00[CEU][hapmap]
rs9301818	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9301820	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9584033	1.00[CEU][hapmap];0.82[YRI][hapmap];1.00[EUR][1000 genomes]
rs9584035	1.00[CEU][hapmap]
rs9584036	0.82[YRI][hapmap]
rs9584037	1.00[CEU][hapmap];0.82[YRI][hapmap]
rs9584038	1.00[CEU][hapmap]
rs9589568	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9589569	1.00[EUR][1000 genomes]
rs9589571	1.00[CEU][hapmap]
rs9589584	1.00[CEU][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456070	chr13:93208593-93298523	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv562730	chr13:93208593-93298523	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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